Excitation of molecules by incident incoherent electromagnetic radiation, such as sunlight, is described in detail and contrasted with the effect of coherent (e.g. laser) light. The nature of the quantum coherences induced by the former, relevant to
transport processes in nature and in technology, is emphasized. Both equilibrium and steady state scenarios are discussed, Three examples: simple models, calcium excitation in polarized light, and the isomerization of retinal in rhodopsin are used to expose the underlying qualitative nature of the established coherences.
The fitting of physical models is often done only using a single target observable. However, when multiple targets are considered, the fitting procedure becomes cumbersome, there being no easy way to quantify the robustness of the model for all diffe
rent observables. Here, we illustrate that one can jointly search for the best model for each desired observable through multi-objective optimization. To do so we construct the Pareto front to study if there exists a set of parameters of the model that can jointly describe multiple, or all, observables. To alleviate the computational cost, the predicted error for each targeted objective is approximated with a Gaussian process model, as it is commonly done in the Bayesian optimization framework. We applied this methodology to improve three different models used in the simulation of stationary state $cis-trans$ photoisomerization of retinal in rhodopsin. Optimization was done with respect to different experimental measurements, including emission spectra, peak absorption frequencies for the $cis$ and $trans$ conformers, and the energy storage.
We show that the cross sections for a broad range of resonant {it inelastic} processes accompanied by excitation exchange (such as spin-exchange, Forster resonant, or angular momentum exchange) exhibit an unconventional near-threshold scaling $E^{Del
ta m_{12}}$, where $E$ is the collision energy, $Delta m_{12}=m_1+m_2-m_1-m_2$, and $m_i$ and $m_i$ are the initial and final angular momentum projections of the colliding species ($i=1,,2$). In particular, the inelastic cross sections for $Delta m_{12}=0$ transitions display an unconventional $E^0$ scaling similar to that of elastic cross sections, and their rates vanish as $T^{Delta m_{12}+1/2}$. For collisions dominated by even partial waves (such as those of identical bosons in the same internal state) the scaling is modified to $sigma_text{inel}propto E^{Delta m_{12} +1} $ if $Delta m_{12}$ is odd. We present accurate quantum scattering calculations that illustrate these modified threshold laws for resonant spin exchange in ultracold Rb+Rb and O$_2$+O$_2$ collisions. Our results illustrate that the threshold scaling of collision cross sections is determined only by the energetics of the underlying process (resonant vs. exothermic) rather than by whether the internal states of colliding particles is changed in the collision.
We present generalized adiabatic theorems for closed and open quantum systems that can be applied to slow modulations of rapidly varying fields, such as oscillatory fields that occur in optical experiments and light induced processes. The generalized
adiabatic theorems show that a sufficiently slow modulation conserves the dynamical modes of time dependent reference Hamiltonians. In the limiting case of modulations of static fields, the standard adiabatic theorems are recovered. Applying these results to periodic fields shows that they remain in Floquet states rather than in energy eigenstates. More generally, these adiabatic theorems can be applied to transformations of arbitrary time-dependent fields, by accounting for the rapidly varying part of the field through the dynamical normal modes, and treating the slow modulation adiabatically. As examples, we apply the generalized theorem to (a) predict the dynamics of a two level system driven by a frequency modulated resonant oscillation, a pathological situation beyond the applicability of earlier results, and (b) to show that open quantum systems driven by slowly turned-on incoherent light, such as biomolecules under natural illumination conditions, can only display coherences that survive in the steady state.
We explore coherent control of Penning and associative ionization in cold collisions of metastable He$^*({2}^3text{S})$ atoms via the quantum interference between different states of the He$_2^*$ collision complex. By tuning the preparation coefficie
nts of the initial atomic spin states, we can benefit from the quantum interference between molecular channels to maximize or minimize the cross sections for Penning and associative ionization. In particular, we find that we can enhance the ionization ratio by 30% in the cold regime. This work is significant for the coherent control of chemical reactions in the cold and ultracold regime.
We show that quantum interference-based coherent control is a highly efficient tool for tuning ultracold molecular collision dynamics, and is free from the limitations of commonly used methods that rely on external electromagnetic fields. By varying
{the relative populations and} phases of an initial coherent superpositions of degenerate molecular states, we demonstrate complete coherent control over integral scattering cross sections in the ultracold $s$-wave regime of both the initial and final collision channels. The proposed control methodology is applied to ultracold O$_2$~+~O$_2$ collisions, showing extensive control over $s$-wave spin-exchange cross sections and product branching ratios over many orders of magnitude.
The photoisomerization reaction of the retinal chromophore in rhodopsin was computationally studied using a two-state two-mode model coupled to thermal baths. Reaction quantum yields at the steady state (10 ps and beyond) were found to be considerabl
y different than their transient values, suggesting a weak correlation between transient and steady-state dynamics in these systems. Significantly, the steady-state quantum yield was highly sensitive to minute changes in system parameters, while transient dynamics was nearly unaffected. Correlation of such sensitivity with standard level spacing statistics of the nonadiabatic vibronic system suggests a possible origin in quantum chaos. The feasibility of experimental observation of this phenomenon and its implications in condensed-phase photochemistry and biological light sensing are discussed.
Light harvesting processes are often computationally studied from a time-dependent viewpoint, in line with ultrafast coherent spectroscopy experiments. Yet, natural processes take place in the presence of incoherent light, which induces a stationary
state. Such stationary states can be described using the eigenbasis of the molecular Hamiltonian, but for realistic systems a full diagonalization is prohibitively expensive. We propose three efficient computational approaches to obtaining the stationary state that circumvent system Hamiltonian diagonalization. The connection between the incoherent perturbations, decoherence, and Kraus operators is established.
Fundamental entanglement related challenges have prevented quantum interference-based control (i.e. coherent control) of collisional cross sections from being implemented in the laboratory. Here, differential cross sections for reactive scattering at
low temperatures are shown to provide a unique opportunity to display such interference-based control by forming coherent superpositions of degenerate rotational states of reactant molecules |jmi with different m. In particular, we identify and quantify a unique signature of coherent control in reactive scattering with applications to F + H2 ! H + HF and HF + D F + HD ! HD + F at 11 K. Control is shown to be extensive.
The non-equilibrium stationary coherences that form in donor-acceptor systems are investigated to determine their relationship to the efficiency of energy transfer to a neighboring reaction center. It is found that the effects of asymmetry in the dim
er are generally detrimental to the transfer of energy. Four types of systems are examined, arising from combinations of localized trapping, delocalized (Forster) trapping, eigenstate dephasing and site basis dephasing. In the cases of site basis dephasing the interplay between the energy gap of the excited dimer states and the environment is shown to give rise to a turnover effect in the efficiency under weak dimer coupling conditions. Furthermore, the nature of the coherences and associated flux are interpreted in terms of pathway interference effects. In addition, regardless of the cases considered, the ratio of the real part and the imaginary part of the coherences in the energy-eigenbasis tends to a constant value in the steady state limit.
