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Non-motile elongated bacteria confined in two-dimensional open micro-channels can exhibit collective motion and form dense monolayers with nematic order if the cells proliferate, i.e., grow and divide. Using soft molecular dynamics simulations of a system of rods interacting through short range mechanical forces, we study the effects of the cell growth rate, the cell aspect ratio and of the sliding friction on nematic ordering and on pressure fluctuations in confined environments. Our results indicate that rods with aspect ratio >3.0 reach quasi-perfect nematic states at low sliding friction. At higher frictions, the global nematic order parameter shows intermittent fluctuations due to sudden losses of order and the time intervals between these bursts are power-law distributed. The pressure transverse to the channel axis can vary abruptly in time and shows hysteresis due to lateral crowding effects. The longitudinal pressure field is on average correlated to nematic order, but it is locally very heterogeneous and its distribution follows an inverse power-law, in sharp contrast with non-active granular systems. We discuss some implications of these findings for tissue growth.
This paper has been temporarily withdrawn by the authors. We have recently found that noise in the experiments is at the origin of the supposed back-and-forth motion which is discussed in the first version of the paper. As a consequence, figs 4 and 5
We report phase separation and liquid-crystal ordering induced by scalar activity in a system of Soft Repulsive Spherocylinders (SRS) of aspect ratio $L/D = 5 $. Activity was introduced by increasing the temperature of half of the SRS (labeled textit
In biological tissues, it is now well-understood that mechanical cues are a powerful mechanism for pattern regulation. While much work has focused on interactions between cells and external substrates, recent experiments suggest that cell polarizatio
A liquid meniscus, a bending rod (also called elastica) and a simple pendulum are all described by the same non-dimensional equation. The oscillatory regime of the pendulum corresponds to buckling rods and pendant drops, and the high-velocity regime
Collective systems across length scales display order in their spatiotemporal patterns. These patterns contain information that correlates with their orders and reflects the system dynamics. Here we show the collective patterns and behaviors of up to