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Beyond Low-frequency Information in Graph Convolutional Networks

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 Added by Deyu Bo
 Publication date 2021
and research's language is English




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Graph neural networks (GNNs) have been proven to be effective in various network-related tasks. Most existing GNNs usually exploit the low-frequency signals of node features, which gives rise to one fundamental question: is the low-frequency information all we need in the real world applications? In this paper, we first present an experimental investigation assessing the roles of low-frequency and high-frequency signals, where the results clearly show that exploring low-frequency signal only is distant from learning an effective node representation in different scenarios. How can we adaptively learn more information beyond low-frequency information in GNNs? A well-informed answer can help GNNs enhance the adaptability. We tackle this challenge and propose a novel Frequency Adaptation Graph Convolutional Networks (FAGCN) with a self-gating mechanism, which can adaptively integrate different signals in the process of message passing. For a deeper understanding, we theoretically analyze the roles of low-frequency signals and high-frequency signals on learning node representations, which further explains why FAGCN can perform well on different types of networks. Extensive experiments on six real-world networks validate that FAGCN not only alleviates the over-smoothing problem, but also has advantages over the state-of-the-arts.



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Graph convolutional networks are becoming indispensable for deep learning from graph-structured data. Most of the existing graph convolutional networks share two big shortcomings. First, they are essentially low-pass filters, thus the potentially useful middle and high frequency band of graph signals are ignored. Second, the bandwidth of existing graph convolutional filters is fixed. Parameters of a graph convolutional filter only transform the graph inputs without changing the curvature of a graph convolutional filter function. In reality, we are uncertain about whether we should retain or cut off the frequency at a certain point unless we have expert domain knowledge. In this paper, we propose Automatic Graph Convolutional Networks (AutoGCN) to capture the full spectrum of graph signals and automatically update the bandwidth of graph convolutional filters. While it is based on graph spectral theory, our AutoGCN is also localized in space and has a spatial form. Experimental results show that AutoGCN achieves significant improvement over baseline methods which only work as low-pass filters.
Graph representation learning resurges as a trending research subject owing to the widespread use of deep learning for Euclidean data, which inspire various creative designs of neural networks in the non-Euclidean domain, particularly graphs. With the success of these graph neural networks (GNN) in the static setting, we approach further practical scenarios where the graph dynamically evolves. Existing approaches typically resort to node embeddings and use a recurrent neural network (RNN, broadly speaking) to regulate the embeddings and learn the temporal dynamics. These methods require the knowledge of a node in the full time span (including both training and testing) and are less applicable to the frequent change of the node set. In some extreme scenarios, the node sets at different time steps may completely differ. To resolve this challenge, we propose EvolveGCN, which adapts the graph convolutional network (GCN) model along the temporal dimension without resorting to node embeddings. The proposed approach captures the dynamism of the graph sequence through using an RNN to evolve the GCN parameters. Two architectures are considered for the parameter evolution. We evaluate the proposed approach on tasks including link prediction, edge classification, and node classification. The experimental results indicate a generally higher performance of EvolveGCN compared with related approaches. The code is available at url{https://github.com/IBM/EvolveGCN}.
94 - Xiao Wang , Meiqi Zhu , Deyu Bo 2020
Graph Convolutional Networks (GCNs) have gained great popularity in tackling various analytics tasks on graph and network data. However, some recent studies raise concerns about whether GCNs can optimally integrate node features and topological structures in a complex graph with rich information. In this paper, we first present an experimental investigation. Surprisingly, our experimental results clearly show that the capability of the state-of-the-art GCNs in fusing node features and topological structures is distant from optimal or even satisfactory. The weakness may severely hinder the capability of GCNs in some classification tasks, since GCNs may not be able to adaptively learn some deep correlation information between topological structures and node features. Can we remedy the weakness and design a new type of GCNs that can retain the advantages of the state-of-the-art GCNs and, at the same time, enhance the capability of fusing topological structures and node features substantially? We tackle the challenge and propose an adaptive multi-channel graph convolutional networks for semi-supervised classification (AM-GCN). The central idea is that we extract the specific and common embeddings from node features, topological structures, and their combinations simultaneously, and use the attention mechanism to learn adaptive importance weights of the embeddings. Our extensive experiments on benchmark data sets clearly show that AM-GCN extracts the most correlated information from both node features and topological structures substantially, and improves the classification accuracy with a clear margin.
200 - Bingbing Xu , Huawei Shen , Qi Cao 2020
Graph convolutional networks gain remarkable success in semi-supervised learning on graph structured data. The key to graph-based semisupervised learning is capturing the smoothness of labels or features over nodes exerted by graph structure. Previous methods, spectral methods and spatial methods, devote to defining graph convolution as a weighted average over neighboring nodes, and then learn graph convolution kernels to leverage the smoothness to improve the performance of graph-based semi-supervised learning. One open challenge is how to determine appropriate neighborhood that reflects relevant information of smoothness manifested in graph structure. In this paper, we propose GraphHeat, leveraging heat kernel to enhance low-frequency filters and enforce smoothness in the signal variation on the graph. GraphHeat leverages the local structure of target node under heat diffusion to determine its neighboring nodes flexibly, without the constraint of order suffered by previous methods. GraphHeat achieves state-of-the-art results in the task of graph-based semi-supervised classification across three benchmark datasets: Cora, Citeseer and Pubmed.
331 - Difan Zou , Ziniu Hu , Yewen Wang 2019
Graph convolutional networks (GCNs) have recently received wide attentions, due to their successful applications in different graph tasks and different domains. Training GCNs for a large graph, however, is still a challenge. Original full-batch GCN training requires calculating the representation of all the nodes in the graph per GCN layer, which brings in high computation and memory costs. To alleviate this issue, several sampling-based methods have been proposed to train GCNs on a subset of nodes. Among them, the node-wise neighbor-sampling method recursively samples a fixed number of neighbor nodes, and thus its computation cost suffers from exponential growing neighbor size; while the layer-wise importance-sampling method discards the neighbor-dependent constraints, and thus the nodes sampled across layer suffer from sparse connection problem. To deal with the above two problems, we propose a new effective sampling algorithm called LAyer-Dependent ImportancE Sampling (LADIES). Based on the sampled nodes in the upper layer, LADIES selects their neighborhood nodes, constructs a bipartite subgraph and computes the importance probability accordingly. Then, it samples a fixed number of nodes by the calculated probability, and recursively conducts such procedure per layer to construct the whole computation graph. We prove theoretically and experimentally, that our proposed sampling algorithm outperforms the previous sampling methods in terms of both time and memory costs. Furthermore, LADIES is shown to have better generalization accuracy than original full-batch GCN, due to its stochastic nature.

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