As a result of unstructured sentences and some misspellings and errors, finding named entities in a noisy environment such as social media takes much more effort. ParsTwiNER contains about 250k tokens, based on standard instructions like MUC-6 or CoN
LL 2003, gathered from Persian Twitter. Using Cohen's Kappa coefficient, the consistency of annotators is 0.95, a high score. In this study, we demonstrate that some state-of-the-art models degrade on these corpora, and trained a new model using parallel transfer learning based on the BERT architecture. Experimental results show that the model works well in informal Persian as well as in formal Persian.
The domain-specialised application of Named Entity Recognition (NER) is known as Biomedical NER (BioNER), which aims to identify and classify biomedical concepts that are of interest to researchers, such as genes, proteins, chemical compounds, drugs,
mutations, diseases, and so on. The BioNER task is very similar to general NER but recognising Biomedical Named Entities (BNEs) is more challenging than recognising proper names from newspapers due to the characteristics of biomedical nomenclature. In order to address the challenges posed by BioNER, seven machine learning models were implemented comparing a transfer learning approach based on fine-tuned BERT with Bi-LSTM based neural models and a CRF model used as baseline. Precision, Recall and F1-score were used as performance scores evaluating the models on two well-known biomedical corpora: JNLPBA and BIOCREATIVE IV (BC-IV). Strict and partial matching were considered as evaluation criteria. The reported results show that a transfer learning approach based on fine-tuned BERT outperforms all others methods achieving the highest scores for all metrics on both corpora.
Information extraction is the task of finding structured information
from unstructured or semi-structured text. It is an important task in
text mining and has been extensively studied in various research
communities including natural language proc
essing, information
retrieval and Web mining. It has a wide range of applications in
domains such as biomedical literature mining and business
intelligence. Two fundamental tasks of information extraction are
named entity recognition and relation extraction. The former refers to
finding names of entities such as people, organizations and
locations. The latter refers to finding the semantic relations between
entities.
