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The intergalactic medium is expected to clump on scales down to $10^4-10^8$ M$_{odot}$ before the onset of reionization. The impact of these small-scale structures on reionization is poorly understood despite the modern understanding that gas clumpiness limits the growth of H II regions. We use a suite of radiation-hydrodynamics simulations that capture the $sim 10^4$ $M_odot$ Jeans mass of unheated gas to study density fluctuations during reionization. Our simulations track the complex ionization and hydrodynamical response of gas in the wake of ionization fronts. The clumping factor of ionized gas (proportional to the recombination rate) rises to a peak value of $5-20$ approximately $Delta t = 10$ Myr after ionization front passage, depending on the incident intensity, redshift, and degree to which the gas had been pre-heated by the first X-ray sources. The clumping factor reaches its relaxed value of $approx 3$ by $Delta t = 300$ Myr. The mean free path of Lyman-limit photons evolves in unison, being up to several times shorter in un-relaxed, recently reionized regions compared to those that were reionized much earlier. Assessing the impact of this response on the global reionizaton process, we find that un-relaxed gaseous structures boost the total number of recombinations by $approx 50$ % and lead to spatial fluctuations in the mean free path that persist appreciably for several hundred million years after the completion of reionization.
During reionization, the intergalactic medium is heated impulsively by supersonic ionization fronts (I-fronts). The peak gas temperatures behind the I-fronts, $T_mathrm{reion}$, are a key uncertainty in models of the thermal history after reionizatio
The diffuse soft X-ray emissivity from galactic winds is computed during the Epoch of Reionization (EoR). We consider two analytic models, a pressure-driven wind and a superbubble model, and a 3D cosmological simulation including gas dynamics from th
We derive constraints on the thermal and ionization states of the intergalactic medium (IGM) at redshift $approx$ 9.1 using new upper limits on the 21-cm power spectrum measured by the LOFAR radio-telescope and a prior on the ionized fraction at that
A major goal of observational and theoretical cosmology is to observe the largely unexplored time period in the history of our universe when the first galaxies form, and to interpret these measurements. Early galaxies dramatically impacted the gas ar
We describe v02 of igmspec, a database of publically available ultraviolet, optical, and near-infrared spectra that probe the intergalactic medium (IGM). This database, a child of the specdb repository in the specdb github organization, comprises 403