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A Chern-Simons current, coming from ghost and anti-ghost fields of supersymmetry theory, can be used to define a spectrum of gene expression in new time series data where a spinor field, as alternative representation of a gene, is adopted instead of using the standard alphabet sequence of bases $A, T, C, G, U$. After a general discussion on the use of supersymmetry in biological systems, we give examples of the use of supersymmetry for living organism, discuss the codon and anti-codon ghost fields and develop an algebraic construction for the trash DNA, the DNA area which does not seem active in biological systems. As a general result, all hidden states of codon can be computed by Chern-Simons 3 forms. Finally, we plot a time series of genetic variations of viral glycoprotein gene and host T-cell receptor gene by using a gene tensor correlation network related to the Chern-Simons current. An empirical analysis of genetic shift, in host cell receptor genes with separated cluster of gene and genetic drift in viral gene, is obtained by using a tensor correlation plot over time series data derived as the empirical mode decomposition of Chern-Simons current.
The commonly-known Chern-Simons extension of Einstein gravitational theory is written in terms of a square-curvature term added to the linear-curvature Hilbert Lagrangian. In a recent paper, we constructed two Chern-Simons extensions according to whe
We write the most general parity-even re-normalizable Chern-Simons term for massive axial-vector propagating torsion fields. After obtaining the most comprehensive action, we perform the causal structure analysis to see what self-interaction term mus
Chern-Simons theory on a closed contact three-manifold is studied when the Lie group for gauge transformations is compact, connected and abelian. A rigorous definition of an abelian Chern-Simons partition function is derived using the Faddeev-Popov g
A few years ago, some of us devised a method to obtain integrable systems in (2+1)-dimensions from the classical non-Abelian pure Chern-Simons action via reduction of the gauge connection in Hermitian symmetric spaces. In this paper we show that the
We argue that a simple Yukawa coupling between the $O(3)$ nonlinear $s$-model and charged Dirac fermions leads, after one-loop quantum corrections, to a Meissner effect, in the disordered phase of the nonlinear $s$-model.