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In recent years, deep learning based methods have shown success in essential medical image analysis tasks such as segmentation. Post-processing and refining the results of segmentation is a common practice to decrease the misclassifications originating from the segmentation network. In addition to widely used methods like Conditional Random Fields (CRFs) which focus on the structure of the segmented volume/area, a graph-based recent approach makes use of certain and uncertain points in a graph and refines the segmentation according to a small graph convolutional network (GCN). However, there are two drawbacks of the approach: most of the edges in the graph are assigned randomly and the GCN is trained independently from the segmentation network. To address these issues, we define a new neighbor-selection mechanism according to feature distances and combine the two networks in the training procedure. According to the experimental results on pancreas segmentation from Computed Tomography (CT) images, we demonstrate improvement in the quantitative measures. Also, examining the dynamic neighbors created by our method, edges between semantically similar image parts are observed. The proposed method also shows qualitative enhancements in the segmentation maps, as demonstrated in the visual results.
Supervised learning method requires a large volume of annotated datasets. Collecting such datasets is time-consuming and expensive. Until now, very few annotated COVID-19 imaging datasets are available. Although self-supervised learning enables us to
International challenges have become the de facto standard for comparative assessment of image analysis algorithms given a specific task. Segmentation is so far the most widely investigated medical image processing task, but the various segmentation
Medical images are increasingly used as input to deep neural networks to produce quantitative values that aid researchers and clinicians. However, standard deep neural networks do not provide a reliable measure of uncertainty in those quantitative va
Accurate image segmentation is crucial for medical imaging applications. The prevailing deep learning approaches typically rely on very large training datasets with high-quality manual annotations, which are often not available in medical imaging. We
Deep learning has successfully been leveraged for medical image segmentation. It employs convolutional neural networks (CNN) to learn distinctive image features from a defined pixel-wise objective function. However, this approach can lead to less out