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تسجيل مستخدم جديدSK-Unet: an Improved U-net Model with Selective Kernel for the Segmentation of Multi-sequence Cardiac MR
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In the clinical environment, myocardial infarction (MI) as one com-mon cardiovascular disease is mainly evaluated based on the late gadolinium enhancement (LGE) cardiac magnetic resonance images (CMRIs). The auto-matic segmentations of left ventricle (LV), right ventricle (RV), and left ven-tricular myocardium (LVM) in the LGE CMRIs are desired for the aided diag-nosis in clinic. To accomplish this segmentation task, this paper proposes a modified U-net architecture by combining multi-sequence CMRIs, including the cine, LGE, and T2-weighted CMRIs. The cine and T2-weighted CMRIs are used to assist the segmentation in the LGE CMRIs. In this segmentation net-work, the squeeze-and-excitation residual (SE-Res) and selective kernel (SK) modules are inserted in the down-sampling and up-sampling stages, respective-ly. The SK module makes the obtained feature maps more informative in both spatial and channel-wise space, and attains more precise segmentation result. The utilized dataset is from the MICCAI challenge (MS-CMRSeg 2019), which is acquired from 45 patients including three CMR sequences. The cine and T2-weighted CMRIs acquired from 35 patients and the LGE CMRIs acquired from 5 patients are labeled. Our method achieves the mean dice score of 0.922 (LV), 0.827 (LVM), and 0.874 (RV) in the LGE CMRIs.
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Automatic and accurate segmentation of the ventricles and myocardium from multi-sequence cardiac MRI (CMR) is crucial for the diagnosis and treatment management for patients suffering from myocardial infarction (MI). However, due to the existence of
domain shift among different modalities of datasets, the performance of deep neural networks drops significantly when the training and testing datasets are distinct. In this paper, we propose an unsupervised domain alignment method to explicitly alleviate the domain shifts among different modalities of CMR sequences, emph{e.g.,} bSSFP, LGE, and T2-weighted. Our segmentation network is attention U-Net with pyramid pooling module, where multi-level feature space and output space adversarial learning are proposed to transfer discriminative domain knowledge across different datasets. Moreover, we further introduce a group-wise feature recalibration module to enforce the fine-grained semantic-level feature alignment that matching features from different networks but with the same class label. We evaluate our method on the multi-sequence cardiac MR Segmentation Challenge 2019 datasets, which contain three different modalities of MRI sequences. Extensive experimental results show that the proposed methods can obtain significant segmentation improvements compared with the baseline models.
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