ﻻ يوجد ملخص باللغة العربية
Statistical analysis on object data presents many challenges. Basic summaries such as means and variances are difficult to compute. We apply ideas from topology to study object data. We present a framework for using persistence landscapes to vectorize object data and perform statistical analysis. We apply to this pipeline to some biological images that were previously shown to be challenging to study using shape theory. Surprisingly, the most persistent features are shown to be topological noise and the statistical analysis depends on the less persistent features which we refer to as the geometric signal. We also describe the first steps to a new approach to using topology for object data analysis, which applies topology to distributions on object spaces.
Topological Data Analysis (TDA) is a rapidly growing field, which studies methods for learning underlying topological structures present in complex data representations. TDA methods have found recent success in extracting useful geometric structures
We introduce giotto-tda, a Python library that integrates high-performance topological data analysis with machine learning via a scikit-learn-compatible API and state-of-the-art C++ implementations. The librarys ability to handle various types of dat
We develop a novel exploratory tool for non-Euclidean object data based on data depth, extending the celebrated Tukeys depth for Euclidean data. The proposed metric halfspace depth, applicable to data objects in a general metric space, assigns to dat
The recent explosion of genomic data has underscored the need for interpretable and comprehensive analyses that can capture complex phylogenetic relationships within and across species. Recombination, reassortment and horizontal gene transfer constit
In this article, we show how the recent statistical techniques developed in Topological Data Analysis for the Mapper algorithm can be extended and leveraged to formally define and statistically quantify the presence of topological structures coming f