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تسجيل مستخدم جديدA Contour-Guided Deformable Image Registration Algorithm for Adaptive Radiotherapy
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In adaptive radiotherapy, deformable image registration is often conducted between the planning CT and treatment CT (or cone beam CT) to generate a deformation vector field (DVF) for dose accumulation and contour propagation. The auto propagated contours on the treatment CT may contain relatively large errors, especially in low contrast regions. A clinician inspection and editing of the propagated contours are frequently needed. The edited contours are able to meet the clinical requirement for adaptive therapy; however, the DVF is still inaccurate and inconsistent with the edited contours. The purpose of this work is to develop a contour-guided deformable image registration (CG-DIR) algorithm to improve the accuracy and consistency of the DVF for adaptive radiotherapy. Incorporation of the edited contours into the registration algorithm is realized by regularizing the objective function of the original demons algorithm with a term of intensity matching between the delineated structures set pairs. The CG-DIR algorithm is implemented on computer graphics processing units (GPUs) by following the original GPU-based demons algorithm computation framework [Gu et al, Phys Med Biol. 55(1): 207-219, 2010]. The performance of CG-DIR is evaluated on five clinical head-and-neck and one pelvic cancer patient data. It is found that compared with the original demons, CG-DIR improves the accuracy and consistency of the DVF, while retaining similar high computational efficiency.
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Adaptive radiotherapy (ART), especially online ART, effectively accounts for positioning errors and anatomical changes. One key component of online ART is accurately and efficiently delineating organs at risk (OARs) and targets on online images, such
as CBCT, to meet the online demands of plan evaluation and adaptation. Deep learning (DL)-based automatic segmentation has gained great success in segmenting planning CT, but its applications to CBCT yielded inferior results due to the low image quality and limited available contour labels for training. To overcome these obstacles to online CBCT segmentation, we propose a registration-guided DL (RgDL) segmentation framework that integrates image registration algorithms and DL segmentation models. The registration algorithm generates initial contours, which were used as guidance by DL model to obtain accurate final segmentations. We had two implementations the proposed framework--Rig-RgDL (Rig for rigid body) and Def-RgDL (Def for deformable)--with rigid body (RB) registration or deformable image registration (DIR) as the registration algorithm respectively and U-Net as DL model architecture. The two implementations of RgDL framework were trained and evaluated on seven OARs in an institutional clinical Head and Neck (HN) dataset. Compared to the baseline approaches using the registration or the DL alone, RgDL achieved more accurate segmentation, as measured by higher mean Dice similarity coefficients (DSC) and other distance-based metrics. Rig-RgDL achieved a DSC of 84.5% on seven OARs on average, higher than RB or DL alone by 4.5% and 4.7%. The DSC of Def-RgDL is 86.5%, higher than DIR or DL alone by 2.4% and 6.7%. The inference time took by the DL model to generate final segmentations of seven OARs is less than one second in RgDL. The resulting segmentation accuracy and efficiency show the promise of applying RgDL framework for online ART.
The purpose of this study is to develop a deep learning based method that can automatically generate segmentations on cone-beam CT (CBCT) for head and neck online adaptive radiation therapy (ART), where expert-drawn contours in planning CT (pCT) can
serve as prior knowledge. Due to lots of artifacts and truncations on CBCT, we propose to utilize a learning based deformable image registration method and contour propagation to get updated contours on CBCT. Our method takes CBCT and pCT as inputs, and output deformation vector field and synthetic CT (sCT) at the same time by jointly training a CycleGAN model and 5-cascaded Voxelmorph model together.The CycleGAN serves to generate sCT from CBCT, while the 5-cascaded Voxelmorph serves to warp pCT to sCTs anatommy. The segmentation results were compared to Elastix, Voxelmorph and 5-cascaded Voxelmorph on 18 structures including left brachial plexus, right brachial plexus, brainstem, oral cavity, middle pharyngeal constrictor, superior pharyngeal constrictor, inferior pharyngeal constrictor, esophagus, nodal gross tumor volume, larynx, mandible, left masseter, right masseter, left parotid gland, right parotid gland, left submandibular gland, right submandibular gland, and spinal cord. Results show that our proposed method can achieve average Dice similarity coefficients and 95% Hausdorff distance of 0.83 and 2.01mm. As compared to other methods, our method has shown better accuracy to Voxelmorph and 5-cascaded Voxelmorph, and comparable accuracy to Elastix but much higher efficiency. The proposed method can rapidly and simultaneously generate sCT with correct CT numbers and propagate contours from pCT to CBCT for online ART re-planning.
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Deformable image registration, aiming to find spatial correspondence between a given image pair, is one of the most critical problems in the domain of medical image analysis. In this paper, we present a generic, fast, and accurate diffeomorphic image
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