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Motivated by applications in network epidemiology, we consider the problem of determining whether it is possible to delete at most $k$ edges from a given input graph (of small treewidth) so that the resulting graph avoids a set $mathcal{F}$ of forbidden subgraphs; of particular interest is the problem of determining whether it is possible to delete at most $k$ edges so that the resulting graph has no connected component of more than $h$ vertices, as this bounds the worst-case size of an epidemic. While even this special case of the problem is NP-complete in general (even when $h=3$), we provide evidence that many of the real-world networks of interest are likely to have small treewidth, and we describe an algorithm which solves the general problem in time genruntime ~on an input graph having $n$ vertices and whose treewidth is bounded by a fixed constant $w$, if each of the subgraphs we wish to avoid has at most $r$ vertices. For the special case in which we wish only to ensure that no component has more than $h$ vertices, we improve on this to give an algorithm running in time $O((wh)^{2w}n)$, which we have implemented and tested on real datasets based on cattle movements.
Spreading processes on graphs are a natural model for a wide variety of real-world phenomena, including information spread over social networks and biological diseases spreading over contact networks. Often, the networks over which these processes sp
We consider a natural variant of the well-known Feedback Vertex Set problem, namely the problem of deleting a small subset of vertices or edges to a full binary tree. This version of the problem is motivated by real-world scenarios that are best modeled by full binary trees. We establish that bo
We present a sublinear time algorithm that allows one to sample multiple edges from a distribution that is pointwise $epsilon$-close to the uniform distribution, in an emph{amortized-efficient} fashion. We consider the adjacency list query model, whe
We study the problem of approximating the largest root of a real-rooted polynomial of degree $n$ using its top $k$ coefficients and give nearly matching upper and lower bounds. We present algorithms with running time polynomial in $k$ that use the to
We develop a new methodology for the efficient computation of epidemic final size distributions for a broad class of Markovian models. We exploit a particular representation of the stochastic epidemic process to derive a method which is both computat