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We introduce a learning strategy for contrast-invariant image registration without requiring imaging data. While classical registration methods accurately estimate the spatial correspondence between images, they solve a costly optimization problem for every image pair. Learning-based techniques are fast at test time, but can only register images with image contrast and geometric content that are similar to those available during training. We focus on removing this image-data dependency of learning methods. Our approach leverages a generative model for diverse label maps and images that exposes networks to a wide range of variability during training, forcing them to learn features invariant to image type (contrast). This strategy results in powerful networks trained to generalize to a broad array of real input images. We present extensive experiments, with a focus on 3D neuroimaging, showing that this strategy enables robust registration of arbitrary image contrasts without the need to retrain for new modalities. We demonstrate registration accuracy that most often surpasses the state of the art both within and across modalities, using a single model. Critically, we show that input labels from which we synthesize images need not be of actual anatomy: training on randomly generated geometric shapes also results in competitive registration performance, albeit slightly less accurate, while alleviating the dependency on real data of any kind. Our code is available at: http://voxelmorph.csail.mit.edu
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Data-driven deep learning approaches to image registration can be less accurate than conventional iterative approaches, especially when training data is limited. To address this whilst retaining the fast inference speed of deep learning, we propose VR-Net, a novel cascaded variational network for unsupervised deformable image registration. Using the variable splitting optimization scheme, we first convert the image registration problem, established in a generic variational framework, into two sub-problems, one with a point-wise, closed-form solution while the other one is a denoising problem. We then propose two neural layers (i.e. warping layer and intensity consistency layer) to model the analytical solution and a residual U-Net to formulate the denoising problem (i.e. generalized denoising layer). Finally, we cascade the warping layer, intensity consistency layer, and generalized denoising layer to form the VR-Net. Extensive experiments on three (two 2D and one 3D) cardiac magnetic resonance imaging datasets show that VR-Net outperforms state-of-the-art deep learning methods on registration accuracy, while maintains the fast inference speed of deep learning and the data-efficiency of variational model.
We analyze the spaces of images encoded by generative networks of the BigGAN architecture. We find that generic multiplicative perturbations away from the photo-realistic point often lead to images which appear as artistic renditions of the corresponding objects. This demonstrates an emergence of aesthetic properties directly from the structure of the photo-realistic environment coupled with its neural network parametrization. Moreover, modifying a deep semantic part of the neural network encoding leads to the appearance of symbolic visual representations.
Deformable image registration is a fundamental task in medical imaging. Due to the large computational complexity of deformable registration of volumetric images, conventional iterative methods usually face the tradeoff between the registration accuracy and the computation time in practice. In order to boost the registration performance in both accuracy and runtime, we propose a fast convolutional neural network. Specially, to efficiently utilize the memory resources and enlarge the model capacity, we adopt additive forwarding instead of channel concatenation and deepen the network in each encoder and decoder stage. To facilitate the learning efficiency, we leverage skip connection within the encoder and decoder stages to enable residual learning and employ an auxiliary loss at the bottom layer with lowest resolution to involve deep supervision. Particularly, the low-resolution auxiliary loss is weighted by an exponentially decayed parameter during the training phase. In conjunction with the main loss in high-resolution grid, a coarse-to-fine learning strategy is achieved. Last but not least, we introduce an auxiliary loss based on the segmentation prior to improve the registration performance in Dice score. Comparing to the auxiliary loss using average Dice score, the proposed multi-label segmentation loss does not induce additional memory cost in the training phase and can be employed on images with arbitrary amount of categories. In the experiments, we show FDRN outperforms the existing state-of-the-art registration methods for brain MR images by resorting to the compact network structure and efficient learning. Besides, FDRN is a generalized framework for image registration which is not confined to a particular type of medical images or anatomy.
Multimodal image registration (MIR) is a fundamental procedure in many image-guided therapies. Recently, unsupervised learning-based methods have demonstrated promising performance over accuracy and efficiency in deformable image registration. However, the estimated deformation fields of the existing methods fully rely on the to-be-registered image pair. It is difficult for the networks to be aware of the mismatched boundaries, resulting in unsatisfactory organ boundary alignment. In this paper, we propose a novel multimodal registration framework, which leverages the deformation fields estimated from both: (i) the original to-be-registered image pair, (ii) their corresponding gradient intensity maps, and adaptively fuses them with the proposed gated fusion module. With the help of auxiliary gradient-space guidance, the network can concentrate more on the spatial relationship of the organ boundary. Experimental results on two clinically acquired CT-MRI datasets demonstrate the effectiveness of our proposed approach.
It has been demonstrated many times that the behavior of the human visual system is connected to the statistics of natural images. Since machine learning relies on the statistics of training data as well, the above connection has interesting implications when using perceptual distances (which mimic the behavior of the human visual system) as a loss function. In this paper, we aim to unravel the non-trivial relationship between the probability distribution of the data, perceptual distances, and unsupervised machine learning. To this end, we show that perceptual sensitivity is correlated with the probability of an image in its close neighborhood. We also explore the relation between distances induced by autoencoders and the probability distribution of the data used for training them, as well as how these induced distances are correlated with human perception. Finally, we discuss why perceptual distances might not lead to noticeable gains in performance over standard Euclidean distances in common image processing tasks except when data is scarce and the perceptual distance provides regularization.
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