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Register a new userCough Detection from Acoustic signals for patient monitoring system
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Cough is one of the most common symptoms in all respiratory diseases. In cases like Chronic Obstructive Pulmonary Disease, Asthma, acute and chronic Bronchitis and the recent pandemic Covid-19, the early identification of cough is important to provide healthcare professionals with useful clinical information such as frequency, severity, and nature of cough to enable better diagnosis. This paper presents and demonstrates best feature selection using MFCC which can help to determine cough events, eventually helping a neural network to learn and improve accuracy of cough detection. The paper proposes to achieve performance of 97.77% Sensitivity (SE), 98.75% Specificity (SP) and 98.17% F1-score with a very light binary classification network of size close to 16K parameters, enabling fitment into smart IoT devices.
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Cough is a common symptom of respiratory and lung diseases. Cough detection is important to prevent, assess and control epidemic, such as COVID-19. This paper proposes a model to detect cough events from cough audio signals. The models are trained by the dataset combined ESC-50 dataset with self-recorded cough recordings. The test dataset contains inpatient cough recordings collected from inpatients of the respiratory disease department in Ruijin Hospital. We totally build 15 cough detection models based on different feature numbers selected by Random Frog, Uninformative Variable Elimination (UVE), and Variable influence on projection (VIP) algorithms respectively. The optimal model is based on 20 features selected from Mel Frequency Cepstral Coefficients (MFCC) features by UVE algorithm and classified with Support Vector Machine (SVM) linear two-class classifier. The best cough detection model realizes the accuracy, recall, precision and F1-score with 94.9%, 97.1%, 93.1% and 0.95 respectively. Its excellent performance with fewer dimensionality of the feature vector shows the potential of being applied to mobile devices, such as smartphones, thus making cough detection remote and non-contact.
We present an automatic non-invasive way of detecting cough events based on both accelerometer and audio signals. The acceleration signals are captured by a smartphone firmly attached to the patients bed, using its integrated accelerometer. The audio signals are captured simultaneously by the same smartphone using an external microphone. We have compiled a manually-annotated dataset containing such simultaneously-captured acceleration and audio signals for approximately 6000 cough and 68000 non-cough events from 14 adult male patients in a tuberculosis clinic. LR, SVM and MLP are evaluated as baseline classifiers and compared with deep architectures such as CNN, LSTM, and Resnet50 using a leave-one-out cross-validation scheme. We find that the studied classifiers can use either acceleration or audio signals to distinguish between coughing and other activities including sneezing, throat-clearing, and movement on the bed with high accuracy. However, in all cases, the deep neural networks outperform the shallow classifiers by a clear margin and the Resnet50 offers the best performance by achieving an AUC exceeding 0.98 and 0.99 for acceleration and audio signals respectively. While audio-based classification consistently offers a better performance than acceleration-based classification, we observe that the difference is very small for the best systems. Since the acceleration signal requires less processing power, and since the need to record audio is sidestepped and thus privacy is inherently secured, and since the recording device is attached to the bed and not worn, an accelerometer-based highly accurate non-invasive cough detector may represent a more convenient and readily accepted method in long-term cough monitoring.
The COVID-19 pandemic has led to the saturation of public health services worldwide. In this scenario, the early diagnosis of SARS-Cov-2 infections can help to stop or slow the spread of the virus and to manage the demand upon health services. This is especially important when resources are also being stretched by heightened demand linked to other seasonal diseases, such as the flu. In this context, the organisers of the DiCOVA 2021 challenge have collected a database with the aim of diagnosing COVID-19 through the use of coughing audio samples. This work presents the details of the automatic system for COVID-19 detection from cough recordings presented by team PANACEA. This team consists of researchers from two European academic institutions and one company: EURECOM (France), University of Granada (Spain), and Biometric Vox S.L. (Spain). We developed several systems based on established signal processing and machine learning methods. Our best system employs a Teager energy operator cepstral coefficients (TECCs) based frontend and Light gradient boosting machine (LightGBM) backend. The AUC obtained by this system on the test set is 76.31% which corresponds to a 10% improvement over the official baseline.
In this work, we consider applying machine learning to the analysis and compression of audio signals in the context of monitoring elephants in sub-Saharan Africa. Earths biodiversity is increasingly under threat by sources of anthropogenic change (e.g. resource extraction, land use change, and climate change) and surveying animal populations is critical for developing conservation strategies. However, manually monitoring tropical forests or deep oceans is intractable. For species that communicate acoustically, researchers have argued for placing audio recorders in the habitats as a cost-effective and non-invasive method, a strategy known as passive acoustic monitoring (PAM). In collaboration with conservation efforts, we construct a large labeled dataset of passive acoustic recordings of the African Forest Elephant via crowdsourcing, compromising thousands of hours of recordings in the wild. Using state-of-the-art techniques in artificial intelligence we improve upon previously proposed methods for passive acoustic monitoring for classification and segmentation. In real-time detection of elephant calls, network bandwidth quickly becomes a bottleneck and efficient ways to compress the data are needed. Most audio compression schemes are aimed at human listeners and are unsuitable for low-frequency elephant calls. To remedy this, we provide a novel end-to-end differentiable method for compression of audio signals that can be adapted to acoustic monitoring of any species and dramatically improves over naive coding strategies.
Acoustic Echo Cancellation (AEC) plays a key role in speech interaction by suppressing the echo received at microphone introduced by acoustic reverberations from loudspeakers. Since the performance of linear adaptive filter (AF) would degrade severely due to nonlinear distortions, background noises, and microphone clipping in real scenarios, deep learning has been employed for AEC for its good nonlinear modelling ability. In this paper, we constructed an end-to-end multi-scale attention neural network for AEC. Temporal convolution is first used to transform waveform into spectrogram. The spectrograms of the far-end reference and the near-end mixture are concatenated, and fed to a temporal convolution network (TCN) with stacked dilated convolution layers. Attention mechanism is performed among these representations from different layers to adaptively extract relevant features by referring to the previous hidden state in the encoder long short-term memory (LSTM) unit. The representations are weighted averaged and fed to the encoder LSTM for the near-end speech estimation. Experiments show the superiority of our method in terms of the echo return loss enhancement (ERLE) for single-talk periods and the perceptual evaluation of speech quality (PESQ) score for double-talk periods in background noise and nonlinear distortion scenarios.
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