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Register a new userSpatio-temporal patterns of influenza B proportions
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We study the spatio-temporal patterns of the proportion of influenza B out of laboratory confirmations of both influenza A and B, with data from 139 countries and regions downloaded from the FluNet compiled by the World Health Organization, from January 2006 to October 2015, excluding 2009. We restricted our analysis to 34 countries that reported more than 2000 confirmations for each of types A and B over the study period. We find that Pearsons correlation is 0.669 between effective distance from Mexico and influenza B proportion among the countries from January 2006 to October 2015. In the United States, influenza B proportion in the pre-pandemic period (2003-2008) negatively correlated with that in the post-pandemic era (2010-2015) at the regional level. Our study limitations are the country-level variations in both surveillance methods and testing policies. Influenza B proportion displayed wide variations over the study period. Our findings suggest that even after excluding 2009s data, the influenza pandemic still has an evident impact on the relative burden of the two influenza types. Future studies could examine whether there are other additional factors. This study has potential implications in prioritizing public health control measures.
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Flu circulates all over the world. The worldwide infection places a substantial burden on peoples health every year. Regardless of the characteristic of the worldwide circulation of flu, most previous studies focused on regional prediction of flu outbreaks. The methodology of considering the spatio-temporal correlation could help forecast flu outbreaks more precisely. Furthermore, forecasting a long-term flu outbreak, and understanding flu infection trends more accurately could help hospitals, clinics, and pharmaceutical companies to better prepare for annual flu outbreaks. Predicting a sequence of values in the future, namely, the multi-step prediction of flu outbreaks should cause concern. Therefore, we highlight the importance of developing spatio-temporal methodologies to perform multi-step prediction of worldwide flu outbreaks. We compared the MAPEs of SVM, RF, LSTM models of predicting flu data of the 1-4 weeks ahead with and without other countries flu data. We found the LSTM models achieved the lowest MAPEs in most cases. As for countries in the Southern hemisphere, the MAPEs of predicting flu data with other countries are higher than those of predicting without other countries. For countries in the Northern hemisphere, the MAPEs of predicting flu data of the 2-4 weeks ahead with other countries are lower than those of predicting without other countries; and the MAPEs of predicting flu data of the 1-weeks ahead with other countries are higher than those of predicting without other countries, except for the UK. In this study, we performed the spatio-temporal multi-step prediction of influenza outbreaks. The methodology considering the spatio-temporal features improves the multi-step prediction of flu outbreaks.
Although foot-and-mouth disease virus (FMDV) incidence has decreased in South America over the last years, the pathogen still circulates in the region and the risk of re-emergence in previously FMDV-free areas is a veterinary public health concern. In this paper we merge environmental, epidemiological and genetic data to reconstruct spatiotemporal patterns and determinants of FMDV serotypes A and O dispersal in South America. Our dating analysis suggests that serotype A emerged in South America around 1930, while serotype O emerged around 1990. The rate of evolution for serotype A was significantly higher compared to serotype O. Phylogeographic inference identified two well-connected sub networks of viral flow, one including Venezuela, Colombia and Ecuador; another including Brazil, Uruguay and Argentina. The spread of serotype A was best described by geographic distances, while trade of live cattle was the predictor that best explained serotype O spread. Our findings show that the two serotypes have different underlying evolutionary and spatial dynamics and may pose different threats to control programmes. Key-words: Phylogeography, foot-and-mouth disease virus, South America, animal trade.
Objectives Influenza outbreaks have been widely studied. However, the patterns between influenza and religious festivals remained unexplored. This study examined the patterns of influenza and Hanukkah in Israel, and that of influenza and Hajj in Bahrain, Egypt, Iraq, Jordan, Oman and Qatar. Method Influenza surveillance data of these seven countries from 2009 to 2017 were downloaded from the FluNet of the World Health Organization. Secondary data were collected for the countries population, and the dates of Hajj and Hanukkah. We aggregated the weekly influenza A and B laboratory confirmations for each country over the study period. Weekly influenza A patterns and religious festival dates were further explored across the study period. Results We found that influenza A peaks closely followed Hanukkah in Israel in six out of seven years from 2010 to 2017. Aggregated influenza A peaks of the other six Middle East countries also occurred right after Hajj every year during the study period. Conclusions We predict that unless there is an emergence of new influenza strain, such influenza patterns are likely to persist in future years. Our results suggested that the optimal timing of mass influenza vaccination should take into considerations of the dates of these religious festivals.
We present a simple mathematical model in which a time averaged pattern emerges out of spatio-temporal chaos as a result of the collective action of chaotic fluctuations. Our evolution equation possesses spatial translational symmetry under a periodic boundary condition. Thus the spatial inhomogeneity of the statistical state arises through a spontaneous symmetry breaking. The transition from a state of homogeneous spatio-temporal chaos to one exhibiting spatial order is explained by introducing a collective viscosity which relates the averaged pattern with a correlation of the fluctuations.
We uncover a novel and robust phenomenon that causes the gradual self-replication of spatiotemporal Kerr cavity patterns in cylindrical microresonators. These patterns are inherently synchronised multi-frequency combs. Under proper conditions, the axially-localized nature of the patterns leads to a fundamental drift instability that induces transitions amongst patterns with a different number of rows. Self-replications, thus, result in the stepwise addition or removal of individual combs along the cylinders axis. Transitions occur in a fully reversible and, consequently, deterministic way. The phenomenon puts forward a novel paradigm for Kerr frequency comb formation and reveals important insights into the physics of multi-dimensional nonlinear patterns.
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