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Register a new userTheory of self-assembly of microtubules and motors
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We derive a model describing spatio-temporal organization of an array of microtubules interacting via molecular motors. Starting from a stochastic model of inelastic polar rods with a generic anisotropic interaction kernel we obtain a set of equations for the local rods concentration and orientation. At large enough mean density of rods and concentration of motors, the model describes an orientational instability. We demonstrate that the orientational instability leads to the formation of vortices and (for large density and/or kernel anisotropy) asters seen in recent experiments. We derive the specific form of the interaction kernel from the detailed analysis of microscopic interaction of two filaments mediated by a moving molecular motor, and extend our results to include variable motor density and motor attachment to the substrate.
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We derive a model describing spatio-temporal organization of an array of microtubules interacting via molecular motors. Starting from a stochastic model of inelastic polar rods with a generic anisotropic interaction kernel we obtain a set of equations for the local rods concentration and orientation. At large enough mean density of rods and concentration of motors, the model describes orientational instability. We demonstrate that the orientational instability leads to the formation of vortices and (for large density and/or kernel anisotropy) asters seen in recent experiments.
Controlling the topology of structures self-assembled from a set of heterogeneous building blocks is highly desirable for many applications, but is poorly understood theoretically. Here we show that the thermodynamic theory of self-assembly involves an inevitable divergence in chemical potential. The divergence and its detailed structure are controlled by the spectrum of the transfer matrix, which summarizes all of self-assembly design degrees of freedom. By analyzing the transfer matrix, we map out the phase boundary between the designable structures and the unstructured aggregates, driven by the level of cross-talk.
Active systems contain self-propelled particles and can spontaneously self-organize into patterns making them attractive candidates for the self-assembly of smart soft materials. One key limitation of our present understanding of these materials hinges on the complexity of the microscopic mechanisms driving its components forward. Here, by combining experiments, analytical theory and simulations we explore such a mechanism for a class of active system, modular microswimmers, which self-assemble from colloids and ion-exchange resins on charged substrates. Our results unveil the self-assembly processes and the working mechanism of the ion-exchange driven motors underlying modular microswimmers, which have so far been illusive, even qualitatively. We apply these motors to show that modular microswimmers can circumvent corners in complex environments and move uphill. Our work closes a central knowledge gap in modular microswimmers and provides a facile route to extract mechanical energy from ion-exchange processes.
Self-propelled colloidal objects, such as motile bacteria or synthetic microswimmers, have microscopically irreversible individual dynamics - a feature they share with all living systems. The incoherent behaviour of individual swimmers can then be harnessed (or rectified) by microfluidic devices that create systematic motions impossible in equilibrium. Examples include flow of rotor particles round a circuit, steady rotation of a gear wheel in a bacterial bath, and pumping of bacteria between chambers by funnel gates. Here we present a computational proof-of-concept study, showing that such active rectification devices might be created directly from an unstructured primordial soup of motile particles, solely by using spatially modulated illumination to control their local propulsion speed. Alongside both microscopic irreversibility and speed modulation, our mechanism requires spatial symmetry breaking, such as a chevron light pattern, and strong interactions between particles, such as volume exclusion causing a collisional slow-down at high density. These four factors create a many-body rectification mechanism that generically differs from one-body microfluidic antecedents. Our work suggests that standard spatial-light-modulator technology might allow the programmable, light-induced self-assembly of active rectification devices from an unstructured particle bath.
We investigate the phase behavior and kinetics of a monodisperse mixture of active (textit{i.e.}, self-propelled) and passive isometric Brownian particles through Brownian dynamics simulations and theory. As in a purely active system, motility of the active component triggers phase separation into a dense and a dilute phase; in the dense phase we further find active-passive segregation, with rafts of passive particles in a sea of active particles. We find that phase separation from an initially disordered mixture can occur with as little as 15 percent of the particles being active. Finally, we show that a system prepared in a suitable fully segregated initial state reproducibly self-assembles an active corona which triggers crystallization of the passive core by initiating a compression wave. Our findings are relevant to the experimental pursuit of directed self-assembly using active particles.
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