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Twin-width and polynomial kernels

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 Added by \\'Edouard Bonnet
 Publication date 2021
and research's language is English




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We study the existence of polynomial kernels, for parameterized problems without a polynomial kernel on general graphs, when restricted to graphs of bounded twin-width. Our main result is that a polynomial kernel for $k$-Dominating Set on graphs of twin-width at most 4 would contradict a standard complexity-theoretic assumption. The reduction is quite involved, especially to get the twin-width upper bound down to 4, and can be tweaked to work for Connected $k$-Dominating Set and Total $k$-Dominating Set (albeit with a worse upper bound on the twin-width). The $k$-Independent Set problem admits the same lower bound by a much simpler argument, previously observed [ICALP 21], which extends to $k$-Independent Dominating Set, $k$-Path, $k$-Induced Path, $k$-Induced Matching, etc. On the positive side, we obtain a simple quadratic vertex kernel for Connected $k$-Vertex Cover and Capacitated $k$-Vertex Cover on graphs of bounded twin-width. Interestingly the kernel applies to graphs of Vapnik-Chervonenkis density 1, and does not require a witness sequence. We also present a more intricate $O(k^{1.5})$ vertex kernel for Connected $k$-Vertex Cover. Finally we show that deciding if a graph has twin-width at most 1 can be done in polynomial time, and observe that most optimization/decision graph problems can be solved in polynomial time on graphs of twin-width at most 1.



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We recently introduced the graph invariant twin-width, and showed that first-order model checking can be solved in time $f(d,k)n$ for $n$-vertex graphs given with a witness that the twin-width is at most $d$, called $d$-contraction sequence or $d$-sequence, and formulas of size $k$ [Bonnet et al., FOCS 20]. The inevitable price to pay for such a general result is that $f$ is a tower of exponentials of height roughly $k$. In this paper, we show that algorithms based on twin-width need not be impractical. We present $2^{O(k)}n$-time algorithms for $k$-Independent Set, $r$-Scattered Set, $k$-Clique, and $k$-Dominating Set when an $O(1)$-sequence is provided. We further show how to solve weighted $k$-Independent Set, Subgraph Isomorphism, and Induced Subgraph Isomorphism, in time $2^{O(k log k)}n$. These algorithms are based on a dynamic programming scheme following the sequence of contractions forward. We then show a second algorithmic use of the contraction sequence, by starting at its end and rewinding it. As an example, we establish that bounded twin-width classes are $chi$-bounded. This significantly extends the $chi$-boundedness of bounded rank-width classes, and does so with a very concise proof. The third algorithmic use of twin-width builds on the second one. Playing the contraction sequence backward, we show that bounded twin-width graphs can be edge-partitioned into a linear number of bicliques, such that both sides of the bicliques are on consecutive vertices, in a fixed vertex ordering. Given that biclique edge-partition, we show how to solve the unweighted Single-Source Shortest Paths and hence All-Pairs Shortest Paths in sublinear time $O(n log n)$ and time $O(n^2 log n)$, respectively. Finally we show that Min Dominating Set and related problems have constant integrality gaps on bounded twin-width classes, thereby getting constant approximations on these classes.
We establish a list of characterizations of bounded twin-width for hereditary, totally ordered binary structures. This has several consequences. First, it allows us to show that a (hereditary) class of matrices over a finite alphabet either contains at least $n!$ matrices of size $n times n$, or at most $c^n$ for some constant $c$. This generalizes the celebrated Stanley-Wilf conjecture/Marcus-Tardos theorem from permutation classes to any matrix class over a finite alphabet, answers our small conjecture [SODA 21] in the case of ordered graphs, and with more work, settles a question first asked by Balogh, Bollobas, and Morris [Eur. J. Comb. 06] on the growth of hereditary classes of ordered graphs. Second, it gives a fixed-parameter approximation algorithm for twin-width on ordered graphs. Third, it yields a full classification of fixed-parameter tractable first-order model checking on hereditary classes of ordered binary structures. Fourth, it provides a model-theoretic characterization of classes with bounded twin-width.
A bipartite graph $G=(A,B,E)$ is ${cal H}$-convex, for some family of graphs ${cal H}$, if there exists a graph $Hin {cal H}$ with $V(H)=A$ such that the set of neighbours in $A$ of each $bin B$ induces a connected subgraph of $H$. Many $mathsf{NP}$-complete problems, including problems such as Dominating Set, Feedback Vertex Set, Induced Matching and List $k$-Colouring, become polynomial-time solvable for ${mathcal H}$-convex graphs when ${mathcal H}$ is the set of paths. In this case, the class of ${mathcal H}$-convex graphs is known as the class of convex graphs. The underlying reason is that the class of convex graphs has bounded mim-width. We extend the latter result to families of ${mathcal H}$-convex graphs where (i) ${mathcal H}$ is the set of cycles, or (ii) ${mathcal H}$ is the set of trees with bounded maximum degree and a bounded number of vertices of degree at least $3$. As a consequence, we can re-prove and strengthen a large number of results on generalized convex graphs known in the literature. To complement result (ii), we show that the mim-width of ${mathcal H}$-convex graphs is unbounded if ${mathcal H}$ is the set of trees with arbitrarily large maximum degree or an arbitrarily large number of vertices of degree at least $3$. In this way we are able to determine complexity dichotomies for the aforementioned graph problems. Afterwards we perform a more refined width-parameter analysis, which shows even more clearly which width parameters are bounded for classes of ${cal H}$-convex graphs.
Kernel methods are fundamental in machine learning, and faster algorithms for kernel approximation provide direct speedups for many core tasks in machine learning. The polynomial kernel is especially important as other kernels can often be approximated by the polynomial kernel via a Taylor series expansion. Recent techniques in oblivious sketching reduce the dependence in the running time on the degree $q$ of the polynomial kernel from exponential to polynomial, which is useful for the Gaussian kernel, for which $q$ can be chosen to be polylogarithmic. However, for more slowly growing kernels, such as the neural tangent and arc-cosine kernels, $q$ needs to be polynomial, and previous work incurs a polynomial factor slowdown in the running time. We give a new oblivious sketch which greatly improves upon this running time, by removing the dependence on $q$ in the leading order term. Combined with a novel sampling scheme, we give the fastest algorithms for approximating a large family of slow-growing kernels.
Inspired by a width invariant defined on permutations by Guillemot and Marx [SODA 14], we introduce the notion of twin-width on graphs and on matrices. Proper minor-closed classes, bounded rank-width graphs, map graphs, $K_t$-free unit $d$-dimensional ball graphs, posets with antichains of bounded size, and proper subclasses of dimension-2 posets all have bounded twin-width. On all these classes (except map graphs without geometric embedding) we show how to compute in polynomial time a sequence of $d$-contractions, witness that the twin-width is at most $d$. We show that FO model checking, that is deciding if a given first-order formula $phi$ evaluates to true for a given binary structure $G$ on a domain $D$, is FPT in $|phi|$ on classes of bounded twin-width, provided the witness is given. More precisely, being given a $d$-contraction sequence for $G$, our algorithm runs in time $f(d,|phi|) cdot |D|$ where $f$ is a computable but non-elementary function. We also prove that bounded twin-width is preserved by FO interpretations and transductions (allowing operations such as squaring or complementing a graph). This unifies and significantly extends the knowledge on fixed-parameter tractability of FO model checking on non-monotone classes, such as the FPT algorithm on bounded-width posets by Gajarsky et al. [FOCS 15].
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