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Register a new userVersaGNN: a Versatile accelerator for Graph neural networks
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Feng Shi
Publication date
2021
fields
Informatics Engineering
and research's language is
English
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textit{Graph Neural Network} (GNN) is a promising approach for analyzing graph-structured data that tactfully captures their dependency information via node-level message passing. It has achieved state-of-the-art performances in many tasks, such as node classification, graph matching, clustering, and graph generation. As GNNs operate on non-Euclidean data, their irregular data access patterns cause considerable computational costs and overhead on conventional architectures, such as GPU and CPU. Our analysis shows that GNN adopts a hybrid computing model. The textit{Aggregation} (or textit{Message Passing}) phase performs vector additions where vectors are fetched with irregular strides. The textit{Transformation} (or textit{Node Embedding}) phase can be either dense or sparse-dense matrix multiplication. In this work, We propose textit{VersaGNN}, an ultra-efficient, systolic-array-based versatile hardware accelerator that unifies dense and sparse matrix multiplication. By applying this single optimized systolic array to both aggregation and transformation phases, we have significantly reduced chip sizes and energy consumption. We then divide the computing engine into blocked systolic arrays to support the textit{Strassen}s algorithm for dense matrix multiplication, dramatically scaling down the number of multiplications and enabling high-throughput computation of GNNs. To balance the workload of sparse-dense matrix multiplication, we also introduced a greedy algorithm to combine sparse sub-matrices of compressed format into condensed ones to reduce computational cycles. Compared with current state-of-the-art GNN software frameworks, textit{VersaGNN} achieves on average 3712$times$ speedup with 1301.25$times$ energy reduction on CPU, and 35.4$times$ speedup with 17.66$times$ energy reduction on GPU.
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The complexity and non-Euclidean structure of graph data hinder the development of data augmentation methods similar to those in computer vision. In this paper, we propose a feature augmentation method for graph nodes based on topological regularization, in which topological structure information is introduced into end-to-end model. Specifically, we first obtain topology embedding of nodes through unsupervised representation learning method based on random walk. Then, the topological embedding as additional features and the original node features are input into a dual graph neural network for propagation, and two different high-order neighborhood representations of nodes are obtained. On this basis, we propose a regularization technique to bridge the differences between the two different node representations, eliminate the adverse effects caused by the topological features of graphs directly used, and greatly improve the performance. We have carried out extensive experiments on a large number of datasets to prove the effectiveness of our model.
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