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Register a new userImage reconstruction through a multimode fiber with a simple neural network architecture
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Multimode fibers (MMFs) have the potential to carry complex images for endoscopy and related applications, but decoding the complex speckle patterns produced by mode-mixing and modal dispersion in MMFs is a serious challenge. Several groups have recently shown that convolutional neural networks (CNNs) can be trained to perform high-fidelity MMF image reconstruction. We find that a considerably simpler neural network architecture, the single hidden layer dense neural network, performs at least as well as previously-used CNNs in terms of image reconstruction fidelity, and is superior in terms of training time and computing resources required. The trained networks can accurately reconstruct MMF images collected over a week after the cessation of the training set, with the dense network performing as well as the CNN over the entire period.
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Recent works have demonstrated that deep learning (DL) based compressed sensing (CS) implementation can accelerate Magnetic Resonance (MR) Imaging by reconstructing MR images from sub-sampled k-space data. However, network architectures adopted in previous methods are all designed by handcraft. Neural Architecture Search (NAS) algorithms can automatically build neural network architectures which have outperformed human designed ones in several vision tasks. Inspired by this, here we proposed a novel and efficient network for the MR image reconstruction problem via NAS instead of manual attempts. Particularly, a specific cell structure, which was integrated into the model-driven MR reconstruction pipeline, was automatically searched from a flexible pre-defined operation search space in a differentiable manner. Experimental results show that our searched network can produce better reconstruction results compared to previous state-of-the-art methods in terms of PSNR and SSIM with 4-6 times fewer computation resources. Extensive experiments were conducted to analyze how hyper-parameters affect reconstruction performance and the searched structures. The generalizability of the searched architecture was also evaluated on different organ MR datasets. Our proposed method can reach a better trade-off between computation cost and reconstruction performance for MR reconstruction problem with good generalizability and offer insights to design neural networks for other medical image applications. The evaluation code will be available at https://github.com/yjump/NAS-for-CSMRI.
Decreasing magnetic resonance (MR) image acquisition times can potentially reduce procedural cost and make MR examinations more accessible. Compressed sensing (CS)-based image reconstruction methods, for example, decrease MR acquisition time by reconstructing high-quality images from data that were originally sampled at rates inferior to the Nyquist-Shannon sampling theorem. In this work we propose a hybrid architecture that works both in the k-space (or frequency-domain) and the image (or spatial) domains. Our network is composed of a complex-valued residual U-net in the k-space domain, an inverse Fast Fourier Transform (iFFT) operation, and a real-valued U-net in the image domain. Our experiments demonstrated, using MR raw k-space data, that the proposed hybrid approach can potentially improve CS reconstruction compared to deep-learning networks that operate only in the image domain. In this study we compare our method with four previously published deep neural networks and examine their ability to reconstruct images that are subsequently used to generate regional volume estimates. We evaluated undersampling ratios of 75% and 80%. Our technique was ranked second in the quantitative analysis, but qualitative analysis indicated that our reconstruction performed the best in hard to reconstruct regions, such as the cerebellum. All images reconstructed with our method were successfully post-processed, and showed good volumetry agreement compared with the fully sampled reconstruction measures.
This paper proposes a particle volume reconstruction directly from an in-line hologram using a deep neural network. Digital holographic volume reconstruction conventionally uses multiple diffraction calculations to obtain sectional reconstructed images from an in-line hologram, followed by detection of the lateral and axial positions, and the sizes of particles by using focus metrics. However, the axial resolution is limited by the numerical aperture of the optical system, and the processes are time-consuming. The method proposed here can simultaneously detect the lateral and axial positions, and the particle sizes via a deep neural network (DNN). We numerically investigated the performance of the DNN in terms of the errors in the detected positions and sizes. The calculation time is faster than conventional diffracted-based approaches.
Shape reconstruction of deformable organs from two-dimensional X-ray images is a key technology for image-guided intervention. In this paper, we propose an image-to-graph convolutional network (IGCN) for deformable shape reconstruction from a single-viewpoint projection image. The IGCN learns relationship between shape/deformation variability and the deep image features based on a deformation mapping scheme. In experiments targeted to the respiratory motion of abdominal organs, we confirmed the proposed framework with a regularized loss function can reconstruct liver shapes from a single digitally reconstructed radiograph with a mean distance error of 3.6mm.
We introduce a system capable of focusing light through a multimode fiber in 37ms, one order of magnitude faster than demonstrated in previous reports. As a result, the focus spot can be maintained during significant bending of the fiber, opening numerous opportunities for endoscopic imaging and energy delivery applications. We measure the transmission matrix of the fiber by projecting binary-amplitude computer generated holograms using a digital micromirror device and a field programmable gate array controller. The system shows two orders of magnitude enhancements of the focus spot relative to the background.
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