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We study the motion of a spherical particle driven by a constant volume force in a confined channel with a fixed square cross-section. The channel is filled with a mixture of two liquids under the effect of thermal fluctuations. We use the lattice Boltzmann method to simulate a fluctuating multicomponent fluid in the mixed-phase, and particle-fluid interactions are tuned to reproduce different wetting properties at the particle surface. The numerical set-up is first validated in the absence of thermal fluctuations; to this aim, we quantitatively compute the drift velocity at changing the particle radius and compare it with previous experimental and numerical data. In the presence of thermal fluctuations, we study the fluctuations in the particles velocity at changing thermal energy, applied force, particle size, and particle wettability. The importance of fluctuations with respect to the mean drift velocity is quantitatively assessed, especially in comparison to unconfined situations. Results show that confinement strongly enhances the importance of velocity fluctuations, which can be one order of magnitude larger than what expected in unconfined domains. The observed findings underscore the versatility of the lattice Boltzmann simulations in concrete applications involving the motion of colloidal particles in a highly confined environment in the presence of thermal fluctuations.
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The bacterium Helicobacter pylori causes ulcers in the stomach of humans by invading mucus layers protecting epithelial cells. It does so by chemically changing the rheological properties of the mucus from a high-viscosity gel to a low-viscosity solution in which it may self-propel. We develop a two-fluid model for this process of swimming under self-generated confinement. We solve exactly for the flow and the locomotion speed of a spherical swimmer located in a spherically symmetric system of two Newtonian fluids whose boundary moves with the swimmer. We also treat separately the special case of an immobile outer fluid. In all cases, we characterise the flow fields, their spatial decay, and the impact of both the viscosity ratio and the degree of confinement on the locomotion speed of the model swimmer. The spatial decay of the flow retains the same power-law decay as for locomotion in a single fluid but with a decreased magnitude. Independently of the assumption chosen to characterise the impact of confinement on the actuation applied by the swimmer, its locomotion speed always decreases with an increase in the degree of confinement. Our modelling results suggest that a low-viscosity region of at least six times the effective swimmer size is required to lead to swimming with speeds similar to locomotion in an infinite fluid, corresponding to a region of size above $approx 25~mu$m for Helicobacter pylori.
The active Brownian particle (ABP) model describes a swimmer, synthetic or living, whose direction of swimming is a Brownian motion. The swimming is due to a propulsion force, and the fluctuations are typically thermal in origin. We present a 2D model where the fluctuations arise from nonthermal noise in a propelling force acting at a single point, such as that due to a flagellum. We take the overdamped limit and find several modifications to the traditional ABP model. Since the fluctuating force causes a fluctuating torque, the diffusion tensor describing the process has a coupling between translational and rotational degrees of freedom. An anisotropic particle also exhibits a noise-induced induced drift. We show that these effects have measurable consequences for the long-time diffusivity of active particles, in particular adding a contribution that is independent of where the force acts.
When a suspension dries, the suspending fluid evaporates, leaving behind a dry film composed of the suspended particles. During the final stages of drying, the height of the fluid film on the substrate drops below the particle size, inducing local interface deformations that lead to strong capillary interactions among the particles. Although capillary interactions between rigid particles are well studied, much is still to be understood about the behaviour of soft particles and the role of their softness during the final stages of film drying. Here, we use our recently-introduced numerical method that couples a fluid described using the lattice Boltzmann approach to a finite element description of deformable objects to investigate the drying process of a film with suspended soft particles. Our measured menisci deformations and lateral capillary forces, which agree well with previous theoretical and experimental works in case of rigid particles, show the deformations become smaller with increasing particles softness, resulting in weaker lateral interaction forces. At large interparticle distances, the force approaches that of rigid particles. Finally, we investigate the time dependent formation of particle clusters at the late stages of the film drying.
We provide numerical evidence that a Kelvin-Helmholtz instability occurs in the Dirac fluid of electrons in graphene and can be detected in current experiments. This instability appears for electrons in the viscous regime passing though a micrometer-scale obstacle and affects measurements on the time scale of nanoseconds. A possible realization with a needle-shaped obstacle is proposed to produce and detect this instability by measuring the electric potential difference between contact points located before and after the obstacle. We also show that, for our setup, the Kelvin-Helmholtz instability leads to the formation of whirlpools similar to the ones reported in Bandurin et al. [Science 351, 1055 (2016)]. To perform the simulations, we develop a lattice Boltzmann method able to recover the full dissipation in a fluid of massless particles.
Hydrodynamic interactions as modeled by Multi-Particle Collision Dynamics can dramatically influence the dynamics of fully flexible, ring-shaped polymers in ways not known for any other polymer architecture or topology. We show that steady shear leads to an inflation scenario exclusive to ring polymers, which depends not only on Weissenberg number but also on contour length of the ring. By analyzing velocity fields of the solvent around the polymer, we show the existence of a hydrodynamic pocket which allows the polymer to self-stabilize at a certain alignment angle to the flow axis. This self-induced stabilization is accompanied by transitioning of the ring to a non-Brownian particle and a cessation of tumbling. The ring swells significantly in the vorticity direction, and the horseshoe regions on the stretched and swollen ring are effectively locked in place relative to the rings center-of-mass. The observed effect is exclusive to ring polymers and stems from an interplay between hydrodynamic interactions and topology. Furthermore, knots tied onto such rings can serve as additional stabilization anchors. Under strong shear, the knotted section is pulled tight and remains well-localized while tank-treading from one horseshoe region to the opposite one in sudden bursts. We find knotted polymers of high contour length behave very similarly to unknotted rings of the same contour length, but small knotted rings feature a host of different configurations. We propose a filtering technique for rings and chains based on our observations and suggest that strong shear could be used to tighten knots on rings.
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