Do you want to publish a course? Click here

A Fused Latent and Graphical Model for Multivariate Binary Data

126   0   0.0 ( 0 )
 Added by Yunxiao Chen
 Publication date 2016
and research's language is English




Ask ChatGPT about the research

We consider modeling, inference, and computation for analyzing multivariate binary data. We propose a new model that consists of a low dimensional latent variable component and a sparse graphical component. Our study is motivated by analysis of item response data in cognitive assessment and has applications to many disciplines where item response data are collected. Standard approaches to item response data in cognitive assessment adopt the multidimensional item response theory (IRT) models. However, human cognition is typically a complicated process and thus may not be adequately described by just a few factors. Consequently, a low-dimensional latent factor model, such as the multidimensional IRT models, is often insufficient to capture the structure of the data. The proposed model adds a sparse graphical component that captures the remaining ad hoc dependence. It reduces to a multidimensional IRT model when the graphical component becomes degenerate. Model selection and parameter estimation are carried out simultaneously through construction of a pseudo-likelihood function and properly chosen penalty terms. The convexity of the pseudo-likelihood function allows us to develop an efficient algorithm, while the penalty terms generate a low-dimensional latent component and a sparse graphical structure. Desirable theoretical properties are established under suitable regularity conditions. The method is applied to the revised Eysencks personality questionnaire, revealing its usefulness in item analysis. Simulation results are reported that show the new method works well in practical situations.

rate research

Read More

Graphical models express conditional independence relationships among variables. Although methods for vector-valued data are well established, functional data graphical models remain underdeveloped. We introduce a notion of conditional independence between random functions, and construct a framework for Bayesian inference of undirected, decomposable graphs in the multivariate functional data context. This framework is based on extending Markov distributions and hyper Markov laws from random variables to random processes, providing a principled alternative to naive application of multivariate methods to discretized functional data. Markov properties facilitate the composition of likelihoods and priors according to the decomposition of a graph. Our focus is on Gaussian process graphical models using orthogonal basis expansions. We propose a hyper-inverse-Wishart-process prior for the covariance kernels of the infinite coefficient sequences of the basis expansion, establish existence, uniqueness, strong hyper Markov property, and conjugacy. Stochastic search Markov chain Monte Carlo algorithms are developed for posterior inference, assessed through simulations, and applied to a study of brain activity and alcoholism.
Among Judea Pearls many contributions to Causality and Statistics, the graphical d-separation} criterion, the do-calculus and the mediation formula stand out. In this chapter we show that d-separation} provides direct insight into an earlier causal model originally described in terms of potential outcomes and event trees. In turn, the resulting synthesis leads to a simplification of the do-calculus that clarifies and separates the underlying concepts, and a simple counterfactual formulation of a complete identification algorithm in causal models with hidden variables.
We propose a latent topic model with a Markovian transition for process data, which consist of time-stamped events recorded in a log file. Such data are becoming more widely available in computer-based educational assessment with complex problem solving items. The proposed model can be viewed as an extension of the hierarchical Bayesian topic model with a hidden Markov structure to accommodate the underlying evolution of an examinees latent state. Using topic transition probabilities along with response times enables us to capture examinees learning trajectories, making clustering/classification more efficient. A forward-backward variational expectation-maximization (FB-VEM) algorithm is developed to tackle the challenging computational problem. Useful theoretical properties are established under certain asymptotic regimes. The proposed method is applied to a complex problem solving item in 2012 Programme for International Student Assessment (PISA 2012).
It has become increasingly common to collect high-dimensional binary data; for example, with the emergence of new sampling techniques in ecology. In smaller dimensions, multivariate probit (MVP) models are routinely used for inferences. However, algorithms for fitting such models face issues in scaling up to high dimensions due to the intractability of the likelihood, involving an integral over a multivariate normal distribution having no analytic form. Although a variety of algorithms have been proposed to approximate this intractable integral, these approaches are difficult to implement and/or inaccurate in high dimensions. We propose a two-stage Bayesian approach for inference on model parameters while taking care of the uncertainty propagation between the stages. We use the special structure of latent Gaussian models to reduce the highly expensive computation involved in joint parameter estimation to focus inference on marginal distributions of model parameters. This essentially makes the method embarrassingly parallel for both stages. We illustrate performance in simulations and applications to joint species distribution modeling in ecology.
Gaussian Graphical models (GGM) are widely used to estimate the network structures in many applications ranging from biology to finance. In practice, data is often corrupted by latent confounders which biases inference of the underlying true graphical structure. In this paper, we compare and contrast two strategies for inference in graphical models with latent confounders: Gaussian graphical models with latent variables (LVGGM) and PCA-based removal of confounding (PCA+GGM). While these two approaches have similar goals, they are motivated by different assumptions about confounding. In this paper, we explore the connection between these two approaches and propose a new method, which combines the strengths of these two approaches. We prove the consistency and convergence rate for the PCA-based method and use these results to provide guidance about when to use each method. We demonstrate the effectiveness of our methodology using both simulations and in two real-world applications.
comments
Fetching comments Fetching comments
mircosoft-partner

هل ترغب بارسال اشعارات عن اخر التحديثات في شمرا-اكاديميا