No Arabic abstract
The SPaCIFY project, which aims at bringing advances in MDE to the satellite flight software industry, advocates a top-down approach built on a domain-specific modeling language named Synoptic. In line with previous approaches to real-time modeling such as Statecharts and Simulink, Synoptic features hierarchical decomposition of application and control modules in synchronous block diagrams and state machines. Its semantics is described in the polychronous model of computation, which is that of the synchronous language Signal.
We define a domain-specific language (DSL) to inductively assemble flow networks from small networks or modules to produce arbitrarily large ones, with interchangeable functionally-equivalent parts. Our small networks or modules are small only as the building blocks in this inductive definition (there is no limit on their size). Associated with our DSL is a type theory, a system of formal annotations to express desirable properties of flow networks together with rules that enforce them as invariants across their interfaces, i.e, the rules guarantee the properties are preserved as we build larger networks from smaller ones. A prerequisite for a type theory is a formal semantics, i.e, a rigorous definition of the entities that qualify as feasible flows through the networks, possibly restricted to satisfy additional efficiency or safety requirements. This can be carried out in one of two ways, as a denotational semantics or as an operational (or reduction) semantics; we choose the first in preference to the second, partly to avoid exponential-growth rewriting in the operational approach. We set up a typing system and prove its soundness for our DSL.
Computer simulations are used widely across the engineering and science disciplines, including in the research and development of magnetic devices using computational micromagnetics. In this work, we identify and review different approaches to configuring simulation runs: (i) the re-compilation of source code, (ii) the use of configuration files, (iii) the graphical user interface, and (iv) embedding the simulation specification in an existing programming language to express the computational problem. We identify the advantages and disadvantages of different approaches and discuss their implications on effectiveness and reproducibility of computational studies and results. Following on from this, we design and describe a domain specific language for micromagnetics that is embedded in the Python language, and allows users to define the micromagnetic simulations they want to carry out in a flexible way. We have implemented this micromagnetic simulation description language together with a computational backend that executes the simulation task using the Object Oriented MicroMagnetic Framework (OOMMF). We illustrate the use of this Python interface for OOMMF by solving the micromagnetic standard problem 4. All the code is publicly available and is open source.
We introduce Devito, a new domain-specific language for implementing high-performance finite difference partial differential equation solvers. The motivating application is exploration seismology where methods such as Full-Waveform Inversion and Reverse-Time Migration are used to invert terabytes of seismic data to create images of the earths subsurface. Even using modern supercomputers, it can take weeks to process a single seismic survey and create a useful subsurface image. The computational cost is dominated by the numerical solution of wave equations and their corresponding adjoints. Therefore, a great deal of effort is invested in aggressively optimizing the performance of these wave-equation propagators for different computer architectures. Additionally, the actual set of partial differential equations being solved and their numerical discretization is under constant innovation as increasingly realistic representations of the physics are developed, further ratcheting up the cost of practical solvers. By embedding a domain-specific language within Python and making heavy use of SymPy, a symbolic mathematics library, we make it possible to develop finite difference simulators quickly using a syntax that strongly resembles the mathematics. The Devito compiler reads this code and applies a wide range of analysis to generate highly optimized and parallel code. This approach can reduce the development time of a verified and optimized solver from months to days.
Program synthesis from input-output examples has been a long-standing challenge, and recent works have demonstrated some success in designing deep neural networks for program synthesis. However, existing efforts in input-output neural program synthesis have been focusing on domain-specific languages, thus the applicability of previous approaches to synthesize code in full-fledged popular programming languages, such as C, remains a question. The main challenges lie in two folds. On the one hand, the program search space grows exponentially when the syntax and semantics of the programming language become more complex, which poses higher requirements on the synthesis algorithm. On the other hand, increasing the complexity of the programming language also imposes more difficulties on data collection, since building a large-scale training set for input-output program synthesis require random program generators to sample programs and input-output examples. In this work, we take the first step to synthesize C programs from input-output examples. In particular, we propose LaSynth, which learns the latent representation to approximate the execution of partially generated programs, even if their semantics are not well-defined. We demonstrate the possibility of synthesizing elementary C code from input-output examples, and leveraging learned execution significantly improves the prediction performance over existing approaches. Meanwhile, compared to the randomly generated ground-truth programs, LaSynth synthesizes more concise programs that resemble human-written code. We show that training on these synthesized programs further improves the prediction performance for both Karel and C program synthesis, indicating the promise of leveraging the learned program synthesizer to improve the dataset quality for input-output program synthesis.
Developers of Molecular Dynamics (MD) codes face significant challenges when adapting existing simulation packages to new hardware. In a continuously diversifying hardware landscape it becomes increasingly difficult for scientists to be experts both in their own domain (physics/chemistry/biology) and specialists in the low level parallelisation and optimisation of their codes. To address this challenge, we describe a Separation of Concerns approach for the development of parallel and optimised MD codes: the science specialist writes code at a high abstraction level in a domain specific language (DSL), which is then translated into efficient computer code by a scientific programmer. In a related context, an abstraction for the solution of partial differential equations with grid based methods has recently been implemented in the (Py)OP2 library. Inspired by this approach, we develop a Python code generation system for molecular dynamics simulations on different parallel architectures, including massively parallel distributed memory systems and GPUs. We demonstrate the efficiency of the auto-generated code by studying its performance and scalability on different hardware and compare it to other state-of-the-art simulation packages. With growing data volumes the extraction of physically meaningful information from the simulation becomes increasingly challenging and requires equally efficient implementations. A particular advantage of our approach is the easy expression of such analysis algorithms. We consider two popular methods for deducing the crystalline structure of a material from the local environment of each atom, show how they can be expressed in our abstraction and implement them in the code generation framework.