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تسجيل مستخدم جديدAb initio evaluation of complexation energies for cyclodextrin drug inclusion complexes
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We examined the reliability of exchange-correlation functionals for molecular encapsulations combined by van der Waals forces, comparing their predictions with those of diffusion Monte Carlo method. We established that functionals with D3 dispersion force correction and including sufficient proportion of exact-exchange in long-ranged interaction can comparatively reliably estimate the binding strength. Our finding agrees with a previous ab initio study on argon dimer. However we found that even such functionals may not be able to distinguish the energy differences among different conformations.
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We performed ab initio lattice-dynamics calculations of frame-cluster dodecaborides ZrB12 and LuB12. As a whole, our calculated phonon frequencies and atom-projected density of states are consistent with the results of available first-principles calc
ulations and experimental measurements. So we conclude that the ab initio DFT approach is quite appropriate to study the sufficiently subtle physics of these compounds. Our experiment-independent calculations provide an explicit quantitative confirmation of mixing the eigenvectors of boron and metal vibrations, which was previously observed in experiments.
We investigate how different chemical environment influences magnetic properties of terbium(III) (Tb)-based single-molecule magnets (SMMs), using first-principles relativistic multireference methods. Recent experiments showed that Tb-based SMMs can h
ave exceptionally large magnetic anisotropy and that they can be used for experimental realization of quantum information applications, with a judicious choice of chemical environment. Here, we perform complete active space self-consistent field (CASSCF) calculations including relativistic spin-orbit interaction (SOI) for representative Tb-based SMMs such as TbPc$_2$ and TbPcNc in three charge states. We calculate low-energy electronic structure from which we compute the Tb crystal-field parameters and construct an effective pseudospin Hamiltonian. Our calculations show that ligand type and fine points of molecular geometry do not affect the zero-field splitting, while the latter varies weakly with oxidation number. On the other hand, higher-energy levels have a strong dependence on all these characteristics. For neutral TbPc$_2$ and TbPcNc molecules, the Tb magnetic moment and the ligand spin are parallel to each other and the coupling strength between them does not depend much on ligand type and details of atomic structure. However, ligand distortion and molecular symmetry play a crucial role in transverse crystal-field parameters which lead to tunnel splitting. The tunnel splitting induces quantum tunneling of magnetization by itself or by combining with other processes. Our results provide insight into mechanisms of magnetization relaxation in the representative Tb-based SMMs.
Controlling the contact angles of the wettability is an important issue especially in industrial applications. Establishing its {it ab initio} predictions is hence a topic of great interest. For the predictions, it is required to setup a model of the
adsorption structure of liquid molecules on a surface. The appropriate setting is expected to depend on whether the surface is of insulating or metallic materials, the latter of which is the target of the present study while all preceding {it ab initio} studies have worked on the former. Since the feasibility of {it ab initio} evaluations relies on the approximation of the liquid-gas interface energy evaluated roughly by the crystal ice, it would be a natural choice to take the periodic honeycomb array of the water molecules as the adsorbing model of water on the surface. Although the periodic model have successfully been used for the preceding treatments of insulating surfaces, we found for the case with metallic surfaces that the periodic model gives worse prediction to reproduce experimental values. Rather than that, the models with isolated water multimers are found to give better predictions. The ambiguity of the models about the size of multimers and the coverage is found to be small ($simpm 10^{circ}$), and is averaged over to give a plausible value based on the Boltzmann weight with the adsorbing energies. The procedure we are providing can generally be applicable to any of wettability on the surfaces of metallic materials.
The accurate calculation of excited state properties of interacting electrons in the condensed phase is an immense challenge in computational physics. Here, we use state-of-the-art equation-of-motion coupled-cluster theory with single and double exci
tations (EOM-CCSD) to calculate the dynamic structure factor, which can be experimentally measured by inelastic x-ray and electron scattering. Our calculations are performed on the uniform electron gas at densities corresponding to Wigner-Seitz radii of $r_s=5$, 4, and 3 corresponding to the valence electron densities of common metals. We compare our results to those obtained using the random-phase approximation, which is known to provide a reasonable description of the collective plasmon excitation and which resums only a small subset of the polarizability diagrams included in EOM-CCSD. We find that EOM-CCSD, instead of providing a perturbative improvement on the RPA plasmon, predicts a many-state plasmon resonance, where each contributing state has a double-excitation character of 80% or more. This finding amounts to an ab initio treatment of the plasmon linewidth, which is in good quantitative agreement with previous diagrammatic calculations, and highlights the strongly correlated nature of lifetime effects in condensed-phase electronic structure theory.
We evaluated the non-additive contributions of the inter-molecular interactions in B-DNA stacking by using diffusion Monte Carlo methods with fixed node approximations (FNDMC). For some base-pair steps, we found that their non-additive contributions
evaluated by FNDMC significantly differ from those by any other {it ab initio} methods, while there are no remarkable findings on their stacking energies themselves. The apparently unexpected results of non-additivity raise issues in both FNDMC and correlated wavefunction methods. For the latter, it can be partly attributed to the imperfect complete basis set (CBS) correction scheme due to the limitation of the computational costs. On the other hand, the striking contrast between the stacking and non-additivity behaviors was found in FNDMC. This might imply that the error cancellations of the fixed node biases in FNDMC work well for the stacking energies, while not for the non-additivity contributions involving charge transfers caused by hydrogen bonds bridging Watson-Crick base pairs.
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