اشترك بالحزمة الذهبية واحصل على وصول غير محدود شمرا أكاديميا
تسجيل مستخدم جديدExtracranial estimation of neural mass model parameters using the Unscented Kalman Filter
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Data assimilation, defined as the fusion of data with preexisting knowledge, is particularly suited to elucidating underlying phenomena from noisy/insufficient observations. Although this approach has been widely used in diverse fields, only recently have efforts been directed to problems in neuroscience, using mainly intracranial data and thus limiting its applicability to invasive measurements involving electrode implants. Here we intend to apply data assimilation to non-invasive electroencephalography (EEG) measurements to infer brain states and their characteristics. For this purpose, we use Kalman filtering to combine synthetic EEG data with a coupled neural-mass model together with Arys model of the head, which projects intracranial signals onto the scalp. Our results show that using several extracranial electrodes allows to successfully estimate the state and parameters of the neural masses and their interactions, whereas one single electrode provides only a very partial and insufficient view of the system. The superiority of using multiple extracranial electrodes over using only one, be it intra- or extracranial, is shown over a wide variety of dynamical behaviours. Our results show potential towards future clinical applications of the method.
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A useful approach to solve inverse problems is to pair the parameter-to-data map with a stochastic dynamical system for the parameter, and then employ techniques from filtering to estimate the parameter given the data. Three classical approaches to f
iltering of nonlinear systems are the extended, ensemble and unscented Kalman filters. The extended Kalman inversion (ExKI) is impractical when the forward map is not readily differentiable and given as a black box, and also for high dimensional parameter spaces because of the need to propagate large covariance matrices. Ensemble Kalman inversion (EKI) has emerged as a useful tool which overcomes both of these issues: it is derivative free and works with a low-rank covariance approximation formed from the ensemble. In this paper, we demonstrate that unscented Kalman methods also provide an effective tool for derivative-free inversion in the setting of black-box forward models, introducing unscented Kalman inversion (UKI). Theoretical analysis is provided for linear inverse problems, and a smoothing property of the data mis-fit under the unscented transform is explained. We provide numerical experiments, including various applications: learning subsurface flow permeability parameters; learning the structure damage field; learning the Navier-Stokes initial condition; and learning subgrid-scale parameters in a general circulation model. The theory and experiments show that the UKI outperforms the EKI on parameter learning problems with moderate numbers of parameters and outperforms the ExKI on problems where the forward model is not readily differentiable, or where the derivative is very sensitive. In particular, UKI based methods are of particular value for parameter estimation problems in which the number of parameters is moderate but the forward model is expensive and provided as a black box which is impractical to differentiate.
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