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Efficient repeat finding via suffix arrays

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 نشر من قبل Ver\\'onica Becher
 تاريخ النشر 2013
  مجال البحث الهندسة المعلوماتية
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We solve the problem of finding interspersed maximal repeats using a suffix array construction. As it is well known, all the functionality of suffix trees can be handled by suffix arrays, gaining practicality. Our solution improves the suffix tree based approaches for the repeat finding problem, being particularly well suited for very large inputs. We prove the corrrectness and complexity of the algorithms.



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