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The intergalactic medium (IGM) prior to the epoch of reionization consists mostly of neutral hydrogen gas. Ly-alpha photons produced by early stars resonantly scatter off hydrogen atoms, causing energy exchange between the radiation field and the gas . This interaction results in moderate heating of the gas due to the recoil of the atoms upon scattering, which is of great interest for future studies of the pre-reionization IGM in the HI 21 cm line. We investigate the effect of this Ly-alpha heating in the IGM with linear density, temperature, and velocity perturbations. Perturbations smaller than the diffusion length of photons could be damped due to heat conduction by Ly-alpha photons. The scale at which damping occurs and the strength of this effect depend on various properties of the gas, the flux of Ly-alpha photons and the way in which photon frequencies are redistributed upon scattering. To find the relevant length scale and the extent to which Ly-alpha heating affects perturbations, we calculate the gas heating rates by numerically solving linearized Boltzmann equations in which scattering is treated by the Fokker-Planck approximation. We find that (1) perturbations add a small correction to the gas heating rate, and (2) the damping of temperature perturbations occurs at scales with comoving wavenumber k>10^4 Mpc^{-1}, which are much smaller than the Jeans scale and thus unlikely to substantially affect the observed 21 cm signal.
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