This paper examines the oscillatory behaviour of complex viscoelastic systems with power law-like relaxation behaviour. Specifically, we use the fractional Maxwell model, consisting of a spring and fractional dashpot in series, which produces a power
-law creep behaviour and a relaxation law following the Mittag-Leffler function. The fractional dashpot is characterised by a parameter beta, continuously moving from the pure viscous behaviour when beta=1 to the purely elastic response when beta=0. In this work, we study the general response function and focus on the oscillatory behaviour of a fractional Maxwell system in four regimes: stress impulse, strain impulse, step stress, and driven oscillations. The solutions are presented in a format analogous to the classical oscillator, showing how the fractional nature of relaxation changes the long-time equilibrium behaviour and the short-time transient solutions. We specifically test the critical damping conditions in the fractional regime, since these have a particular relevance in biomechanics.
F1F0 ATP synthase (ATPase) either facilitates the synthesis of ATP in the mitochondrial membranes and bacterial inner membranes in a process driven by the proton moving force (pmf), or uses the energy from ATP hydrolysis to pump protons against the c
oncentration gradient across the membrane. ATPase is composed of two rotary motors, F0 and F1, which generate the opposing rotation and compete for control of their shared central gamma-shaft. Here we present a self-consistent physical model of the F1 motor as a simplified two-state Brownian ratchet based on the asymmetry of torsional elastic energy of the coiled-coil gamma-shaft. This stochastic model unifies the physical description of linear and rotary motors and explains the stepped unidirectional rotation of the $gamma$-shaft, in agreement with the `binding-change ideas of Boyer. Substituting the model parameters, all independently known from recent experiments, our model quantitatively reproduces the ATPase operation, e.g. the `no-load angular velocity is ca. 400~rad/s anticlockwise at 4 mM ATP, in close agreement with experiment. Increasing the pmf torque exerted by F0 can slow, stop and overcome the torque generated by F1, switching from ATP hydrolysis to synthesis at a very low value of `stall torque. We discuss the matters of the motor efficiency, which is very low if calculated from the useful mechanical work it produces - but is quite high when the `useful outcome is measured in the number of H+ pushed against the chemical gradient in the F1 ATP-driven operation.
Paradigmatic model systems, which are used to study the mechanical response of matter, are random networks of point-atoms, random sphere packings, or simple crystal lattices, all of these models assume central-force interactions between particles/ato
ms. Each of these models differs in the spatial arrangement and the correlations among particles. In turn, this is reflected in the widely different behaviours of the shear (G) and compression (K) elastic moduli. The relation between the macroscopic elasticity as encoded in G, K and their ratio, and the microscopic lattice structure/order, is not understood. We provide a quantitative analytical connection between the local orientational order and the elasticity in model amorphous solids with different internal microstructure, focusing on the two opposite limits of packings (strong excluded-volume) and networks (no excluded-volume). The theory predicts that, in packings, the local orientational order due to excluded-volume causes less nonaffinity (less softness or larger stiffness) under compression than under shear. This leads to lower values of G/K, a well-documented phenomenon which was lacking a microscopic explanation. The theory also provides an excellent one-parameter description of the elasticity of compressed emulsions in comparison with experimental data over a broad range of packing fractions.
The atomic theory of elasticity of amorphous solids, based on the nonaffine response formalism, is extended into the nonlinear stress-strain regime by coupling with the underlying irreversible many-body dynamics. The latter is implemented in compact
analytical form using a qualitative method for the many-body Smoluchowski equation. The resulting nonlinear stress-strain (constitutive) relation is very simple, with few fitting parameters, yet contains all the microscopic physics. The theory is successfully tested against experimental data on metallic glasses, and it is able to reproduce the ubiquitous feature of stress-strain overshoot upon varying temperature and shear rate. A clear atomic-level interpretation is provided for the stress overshoot, in terms of the competition between the elastic instability caused by nonaffine deformation of the glassy cage and the stress buildup due to viscous dissipation.
We show theoretically that flexoelectricity stabilizes blue phases in chiral liquid crystals. Induced internal polarization reduces the elastic energy cost of splay and bend deformations surrounding singular lines in the director field. The energy of
regions of double twist is unchanged. This in turn reduces the free energy of the blue phase with respect to that of the chiral nematic phase, leading to stability over a wider temperature range. The theory explains the discovery of large temperature range blue phases in highly flexoelectric bimesogenic and bent-core materials, and predicts how this range may be increased further.
We propose a simple model to describe the cavitation-induced breakage of mesoscale filaments during their sonication in solution. The model predicts a limiting length below which scission no longer occurs. This characteristic length is a function of
the tensile strength and diameter of the filament, as well as the solvent viscosity and cavitation parameters. We show that the model predicts accurately experimental results for materials ranging from carbon nanotubes to protein fibrils, and discuss the use of sonication-induced breakage as a probe for the strength of nanostructures.
Biological molecules can form hydrogen bonds between nearby residues, leading to helical secondary structures. The associated reduction of configurational entropy leads to a temperature dependence of this effect: the helix-coil transition. Since the
formation of helices implies a dramatic shortening of the polymer dimensions, an externally imposed end-to-end distance R affects the equilibrium helical fraction of the polymer and the resulting force- extension curves show anomalous plateau regimes. In this article, we investigate the behaviour of a cross-linked network of such helicogenic molecules, particularly, focusing on the coupling of the (average) helical content present in a network to the externally imposed strain. We show that both an elongation and compression can lead to an increase in helical domains under appropriate conditions.
We report a dynamical-mechanical study of stress relaxation at small deformation in a natural (polyisoprene) rubber well above its glass transition temperature Tg. We find that an almost complete relaxation of stress takes place over very long period
s of time, even though the elastic network integrity is fully retained. The relaxation rate and the long-time equilibrium modulus are sensitive functions of temperature which do not follow time-temperature superposition. Many characteristic features of non-ergodic ageing response are apparent at both short and very long times. We interpret the observed behaviour in terms of the properties of rubber crosslinks, capable of isomerisation under stress, and relate the results to recent models of soft glassy rheology.
