Bounding the coarse graining error in hidden Markov dynamics

Lumping a Markov process introduces a coarser level of description that is useful in many contexts and applications. The dynamics on the coarse grained states is often approximated by its Markovian component. In this letter we derive finite-time bounds on the error in this approximation. These results hold for non-reversible dynamics and for probabilistic mappings between microscopic and coarse grained states.

Nonlinear transport effects in mass separation by effusion

Generalizations of Onsager reciprocity relations are established for the nonlinear response coefficients of ballistic transport in the effusion of gaseous mixtures. These generalizations, which have been established on the basis of the fluctuation theorem for the currents, are here considered for mass separation by effusion. In this kinetic process, the mean values of the currents depend nonlinearly on the affinities or thermodynamic forces controlling the nonequilibrium constraints. These nonlinear transport effects are shown to play an important role in the process of mass separation. In particular, the entropy efficiency turns out to be significantly larger than it would be the case if the currents were supposed to depend linearly on the affinities.

Cycle decomposition of full counting statistics

This paper has been withdrawn by the author due to an error in the derivation.

Spectral signature of nonequilibrium conditions

The study of stochastic systems has received considerable interest over the years. Their dynamics can describe many equilibrium and nonequilibrium fluctuating systems. At the same time, nonequilibrium constraints interact with the time evolution in various ways. Here we review the dynamics of stochastic systems from the viewpoint of nonequilibrium thermodynamics. We explore the effect of external thermodynamic forces on the possible dynamical regimes and show that the time evolution can become intrinsically different under nonequilibrium conditions. For example, nonequilibrium systems with real dynamical components are similar to equilibrium ones when their state space dimension N < 5, but this equivalence is lost in higher dimensions. Out of equilibrium systems thus present new dynamical behaviors with respect to their equilibrium counterpart. We also study the dynamical modes of generalized, non-stochastic evolution operators such as those arising in counting statistics.

Stochastic approach and fluctuation theorem for ion transport

We present a stochastic approach for ion transport at the mesoscopic level. The description takes into account the self-consistent electric field generated by the fixed and mobile charges as well as the discrete nature of these latter. As an application we study the noise in the ion transport process, including the effect of the displacement current generated by the fluctuating electric field. The fluctuation theorem is shown to hold for the electric current with and without the displacement current.

Thermodynamic large fluctuations from uniformized dynamics

Large fluctuations have received considerable attention as they encode information on the fine-scale dynamics. Large deviation relations known as fluctuation theorems also capture crucial nonequilibrium thermodynamical properties. Here we report that, using the technique of uniformization, the thermodynamic large deviation functions of continuous-time Markov processes can be obtained from Markov chains evolving in discrete time. This formulation offers new theoretical and numerical approaches to explore large deviation properties. In particular, the time evolution of autonomous and non-autonomous processes can be expressed in terms of a single Poisson rate. In this way the uniformization procedure leads to a simple and efficient way to simulate stochastic trajectories that reproduce the exact fluxes statistics. We illustrate the formalism for the current fluctuations in a stochastic pump model.

Firing Rate of Noisy Integrate-and-fire Neurons with Synaptic Current Dynamics

We derive analytical formulae for the firing rate of integrate-and-fire neurons endowed with realistic synaptic dynamics. In particular we include the possibility of multiple synaptic inputs as well as the effect of an absolute refractory period into the description.

Quantum work relations and response theory

A universal quantum work relation is proved for isolated time-dependent Hamiltonian systems in a magnetic field as the consequence of microreversibility. This relation involves a functional of an arbitrary observable. The quantum Jarzynski equality is recovered in the case this observable vanishes. The Green-Kubo formula and the Casimir-Onsager reciprocity relations are deduced thereof in the linear response regime.