No Arabic abstract
In this work, we consider the problem of robust parameter estimation from observational data in the context of linear structural equation models (LSEMs). LSEMs are a popular and well-studied class of models for inferring causality in the natural and social sciences. One of the main problems related to LSEMs is to recover the model parameters from the observational data. Under various conditions on LSEMs and the model parameters the prior work provides efficient algorithms to recover the parameters. However, these results are often about generic identifiability. In practice, generic identifiability is not sufficient and we need robust identifiability: small changes in the observational data should not affect the parameters by a huge amount. Robust identifiability has received far less attention and remains poorly understood. Sankararaman et al. (2019) recently provided a set of sufficient conditions on parameters under which robust identifiability is feasible. However, a limitation of their work is that their results only apply to a small sub-class of LSEMs, called ``bow-free paths. In this work, we significantly extend their work along multiple dimensions. First, for a large and well-studied class of LSEMs, namely ``bow free models, we provide a sufficient condition on model parameters under which robust identifiability holds, thereby removing the restriction of paths required by prior work. We then show that this sufficient condition holds with high probability which implies that for a large set of parameters robust identifiability holds and that for such parameters, existing algorithms already achieve robust identifiability. Finally, we validate our results on both simulated and real-world datasets.
Complex systems can be modelled at various levels of detail. Ideally, causal models of the same system should be consistent with one another in the sense that they agree in their predictions of the effects of interventions. We formalise this notion of consistency in the case of Structural Equation Models (SEMs) by introducing exact transformations between SEMs. This provides a general language to consider, for instance, the different levels of description in the following three scenarios: (a) models with large numbers of variables versus models in which the `irrelevant or unobservable variables have been marginalised out; (b) micro-level models versus macro-level models in which the macro-variables are aggregate features of the micro-variables; (c) dynamical time series models versus models of their stationary behaviour. Our analysis stresses the importance of well specified interventions in the causal modelling process and sheds light on the interpretation of cyclic SEMs.
Constraint-based causal discovery from limited data is a notoriously difficult challenge due to the many borderline independence test decisions. Several approaches to improve the reliability of the predictions by exploiting redundancy in the independence information have been proposed recently. Though promising, existing approaches can still be greatly improved in terms of accuracy and scalability. We present a novel method that reduces the combinatorial explosion of the search space by using a more coarse-grained representation of causal information, drastically reducing computation time. Additionally, we propose a method to score causal predictions based on their confidence. Crucially, our implementation also allows one to easily combine observational and interventional data and to incorporate various types of available background knowledge. We prove soundness and asymptotic consistency of our method and demonstrate that it can outperform the state-of-the-art on synthetic data, achieving a speedup of several orders of magnitude. We illustrate its practical feasibility by applying it on a challenging protein data set.
We address the problem of estimating the effect of intervening on a set of variables X from experiments on a different set, Z, that is more accessible to manipulation. This problem, which we call z-identifiability, reduces to ordinary identifiability when Z = empty and, like the latter, can be given syntactic characterization using the do-calculus [Pearl, 1995; 2000]. We provide a graphical necessary and sufficient condition for z-identifiability for arbitrary sets X,Z, and Y (the outcomes). We further develop a complete algorithm for computing the causal effect of X on Y using information provided by experiments on Z. Finally, we use our results to prove completeness of do-calculus relative to z-identifiability, a result that does not follow from completeness relative to ordinary identifiability.
Data scarcity is a tremendous challenge in causal effect estimation. In this paper, we propose to exploit additional data sources to facilitate estimating causal effects in the target population. Specifically, we leverage additional source datasets which share similar causal mechanisms with the target observations to help infer causal effects of the target population. We propose three levels of knowledge transfer, through modelling the outcomes, treatments, and confounders. To achieve consistent positive transfer, we introduce learnable parametric transfer factors to adaptively control the transfer strength, and thus achieving a fair and balanced knowledge transfer between the sources and the target. The proposed method can infer causal effects in the target population without prior knowledge of data discrepancy between the additional data sources and the target. Experiments on both synthetic and real-world datasets show the effectiveness of the proposed method as compared with recent baselines.
Learning the causal structure that underlies data is a crucial step towards robust real-world decision making. The majority of existing work in causal inference focuses on determining a single directed acyclic graph (DAG) or a Markov equivalence class thereof. However, a crucial aspect to acting intelligently upon the knowledge about causal structure which has been inferred from finite data demands reasoning about its uncertainty. For instance, planning interventions to find out more about the causal mechanisms that govern our data requires quantifying epistemic uncertainty over DAGs. While Bayesian causal inference allows to do so, the posterior over DAGs becomes intractable even for a small number of variables. Aiming to overcome this issue, we propose a form of variational inference over the graphs of Structural Causal Models (SCMs). To this end, we introduce a parametric variational family modelled by an autoregressive distribution over the space of discrete DAGs. Its number of parameters does not grow exponentially with the number of variables and can be tractably learned by maximising an Evidence Lower Bound (ELBO). In our experiments, we demonstrate that the proposed variational posterior is able to provide a good approximation of the true posterior.