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Register a new userThe EIHW-GLAM Deep Attentive Multi-model Fusion System for Cough-based COVID-19 Recognition in the DiCOVA 2021 Challenge
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Added by
Zhao Ren
Publication date
2021
fields
Informatics Engineering
and research's language is
English
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Aiming to automatically detect COVID-19 from cough sounds, we propose a deep attentive multi-model fusion system evaluated on the Track-1 dataset of the DiCOVA 2021 challenge. Three kinds of representations are extracted, including hand-crafted features, image-from-audio-based deep representations, and audio-based deep representations. Afterwards, the best models on the three types of features are fused at both the feature level and the decision level. The experimental results demonstrate that the proposed attention-based fusion at the feature level achieves the best performance (AUC: 77.96%) on the test set, resulting in an 8.05% improvement over the official baseline.
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The COVID-19 pandemic has led to the saturation of public health services worldwide. In this scenario, the early diagnosis of SARS-Cov-2 infections can help to stop or slow the spread of the virus and to manage the demand upon health services. This is especially important when resources are also being stretched by heightened demand linked to other seasonal diseases, such as the flu. In this context, the organisers of the DiCOVA 2021 challenge have collected a database with the aim of diagnosing COVID-19 through the use of coughing audio samples. This work presents the details of the automatic system for COVID-19 detection from cough recordings presented by team PANACEA. This team consists of researchers from two European academic institutions and one company: EURECOM (France), University of Granada (Spain), and Biometric Vox S.L. (Spain). We developed several systems based on established signal processing and machine learning methods. Our best system employs a Teager energy operator cepstral coefficients (TECCs) based frontend and Light gradient boosting machine (LightGBM) backend. The AUC obtained by this system on the test set is 76.31% which corresponds to a 10% improvement over the official baseline.
COVID-19 has resulted in over 100 million infections and caused worldwide lock downs due to its high transmission rate and limited testing options. Current diagnostic tests can be expensive, limited in availability, time-intensive and require risky in-person appointments. It has been established that symptomatic COVID-19 seriously impairs normal functioning of the respiratory system, thus affecting the coughing acoustics. The 2021 DiCOVA Challenge @ INTERSPEECH was designed to find scientific and engineering insights to the question by enabling participants to analyze an acoustic dataset gathered from COVID-19 positive and non-COVID-19 individuals. In this report we describe our participation in the Challenge (Track 1). We achieved 82.37% AUC ROC on the blind test outperforming the Challenges baseline of 69.85%.
The INTERSPEECH 2021 Computational Paralinguistics Challenge addresses four different problems for the first time in a research competition under well-defined conditions: In the COVID-19 Cough and COVID-19 Speech Sub-Challenges, a binary classification on COVID-19 infection has to be made based on coughing sounds and speech; in the Escalation SubChallenge, a three-way assessment of the level of escalation in a dialogue is featured; and in the Primates Sub-Challenge, four species vs background need to be classified. We describe the Sub-Challenges, baseline feature extraction, and classifiers based on the usual COMPARE and BoAW features as well as deep unsupervised representation learning using the AuDeep toolkit, and deep feature extraction from pre-trained CNNs using the Deep Spectrum toolkit; in addition, we add deep end-to-end sequential modelling, and partially linguistic analysis.
Testing capacity for COVID-19 remains a challenge globally due to the lack of adequate supplies, trained personnel, and sample-processing equipment. These problems are even more acute in rural and underdeveloped regions. We demonstrate that solicited-cough sounds collected over a phone, when analysed by our AI model, have statistically significant signal indicative of COVID-19 status (AUC 0.72, t-test,p <0.01,95% CI 0.61-0.83). This holds true for asymptomatic patients as well. Towards this, we collect the largest known(to date) dataset of microbiologically confirmed COVID-19 cough sounds from 3,621 individuals. When used in a triaging step within an overall testing protocol, by enabling risk-stratification of individuals before confirmatory tests, our tool can increase the testing capacity of a healthcare system by 43% at disease prevalence of 5%, without additional supplies, trained personnel, or physical infrastructure
This paper describes the ByteDance speaker diarization system for the fourth track of the VoxCeleb Speaker Recognition Challenge 2021 (VoxSRC-21). The VoxSRC-21 provides both the dev set and test set of VoxConverse for use in validation and a standalone test set for evaluation. We first collect the duration and signal-to-noise ratio (SNR) of all audio and find that the distribution of the VoxConverses test set and the VoxSRC-21s test set is more closer. Our system consists of voice active detection (VAD), speaker embedding extraction, spectral clustering followed by a re-clustering step based on agglomerative hierarchical clustering (AHC) and overlapped speech detection and handling. Finally, we integrate systems with different time scales using DOVER-Lap. Our best system achieves 5.15% of the diarization error rate (DER) on evaluation set, ranking the second at the diarization track of the challenge.
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