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Register a new userA Multi-Semantic Metapath Model for Large Scale Heterogeneous Network Representation Learning
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Xuandong Zhao
Publication date
2020
fields
Informatics Engineering
and research's language is
English
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Network Embedding has been widely studied to model and manage data in a variety of real-world applications. However, most existing works focus on networks with single-typed nodes or edges, with limited consideration of unbalanced distributions of nodes and edges. In real-world applications, networks usually consist of billions of various types of nodes and edges with abundant attributes. To tackle these challenges, in this paper we propose a multi-semantic metapath (MSM) model for large scale heterogeneous representation learning. Specifically, we generate multi-semantic metapath-based random walks to construct the heterogeneous neighborhood to handle the unbalanced distributions and propose a unified framework for the embedding learning. We conduct systematical evaluations for the proposed framework on two challenging datasets: Amazon and Alibaba. The results empirically demonstrate that MSM can achieve relatively significant gains over previous state-of-arts on link prediction.
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A large number of real-world graphs or networks are inherently heterogeneous, involving a diversity of node types and relation types. Heterogeneous graph embedding is to embed rich structural and semantic information of a heterogeneous graph into low-dimensional node representations. Existing models usually define multiple metapaths in a heterogeneous graph to capture the composite relations and guide neighbor selection. However, these models either omit node content features, discard intermediate nodes along the metapath, or only consider one metapath. To address these three limitations, we propose a new model named Metapath Aggregated Graph Neural Network (MAGNN) to boost the final performance. Specifically, MAGNN employs three major components, i.e., the node content transformation to encapsulate input node attributes, the intra-metapath aggregation to incorporate intermediate semantic nodes, and the inter-metapath aggregation to combine messages from multiple metapaths. Extensive experiments on three real-world heterogeneous graph datasets for node classification, node clustering, and link prediction show that MAGNN achieves more accurate prediction results than state-of-the-art baselines.
Aiming at better representing multivariate relationships, this paper investigates a motif dimensional framework for higher-order graph learning. The graph learning effectiveness can be improved through OFFER. The proposed framework mainly aims at accelerating and improving higher-order graph learning results. We apply the acceleration procedure from the dimensional of network motifs. Specifically, the refined degree for nodes and edges are conducted in two stages: (1) employ motif degree of nodes to refine the adjacency matrix of the network; and (2) employ motif degree of edges to refine the transition probability matrix in the learning process. In order to assess the efficiency of the proposed framework, four popular network representation algorithms are modified and examined. By evaluating the performance of OFFER, both link prediction results and clustering results demonstrate that the graph representation learning algorithms enhanced with OFFER consistently outperform the original algorithms with higher efficiency.
With the recent technological advances, biological datasets, often represented by networks (i.e., graphs) of interacting entities, proliferate with unprecedented complexity and heterogeneity. Although modern network science opens new frontiers of analyzing connectivity patterns in such datasets, we still lack data-driven methods for extracting an integral connectional fingerprint of a multi-view graph population, let alone disentangling the typical from the atypical variations across the population samples. We present the multi-view graph normalizer network (MGN-Net; https://github.com/basiralab/MGN-Net), a graph neural network based method to normalize and integrate a set of multi-view biological networks into a single connectional template that is centered, representative, and topologically sound. We demonstrate the use of MGN-Net by discovering the connectional fingerprints of healthy and neurologically disordered brain network populations including Alzheimers disease and Autism spectrum disorder patients. Additionally, by comparing the learned templates of healthy and disordered populations, we show that MGN-Net significantly outperforms conventional network integration methods across extensive experiments in terms of producing the most centered templates, recapitulating unique traits of populations, and preserving the complex topology of biological networks. Our evaluations showed that MGN-Net is powerfully generic and easily adaptable in design to different graph-based problems such as identification of relevant connections, normalization and integration.
Author name ambiguity causes inadequacy and inconvenience in academic information retrieval, which raises the necessity of author name disambiguation (AND). Existing AND methods can be divided into two categories: the models focusing on content information to distinguish whether two papers are written by the same author, the models focusing on relation information to represent information as edges on the network and to quantify the similarity among papers. However, the former requires adequate labeled samples and informative negative samples, and are also ineffective in measuring the high-order connections among papers, while the latter needs complicated feature engineering or supervision to construct the network. We propose a novel generative adversarial framework to grow the two categories of models together: (i) the discriminative module distinguishes whether two papers are from the same author, and (ii) the generative module selects possibly homogeneous papers directly from the heterogeneous information network, which eliminates the complicated feature engineering. In such a way, the discriminative module guides the generative module to select homogeneous papers, and the generative module generates high-quality negative samples to train the discriminative module to make it aware of high-order connections among papers. Furthermore, a self-training strategy for the discriminative module and a random walk based generating algorithm are designed to make the training stable and efficient. Extensive experiments on two real-world AND benchmarks demonstrate that our model provides significant performance improvement over the state-of-the-art methods.
Network representation learning (NRL) is an effective graph analytics technique and promotes users to deeply understand the hidden characteristics of graph data. It has been successfully applied in many real-world tasks related to network science, such as social network data processing, biological information processing, and recommender systems. Deep Learning is a powerful tool to learn data features. However, it is non-trivial to generalize deep learning to graph-structured data since it is different from the regular data such as pictures having spatial information and sounds having temporal information. Recently, researchers proposed many deep learning-based methods in the area of NRL. In this survey, we investigate classical NRL from traditional feature learning method to the deep learning-based model, analyze relationships between them, and summarize the latest progress. Finally, we discuss open issues considering NRL and point out the future directions in this field.
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