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We present a methodology for integrating functional data into deep densely connected feed-forward neural networks. The model is defined for scalar responses with multiple functional and scalar covariates. A by-product of the method is a set of dynamic functional weights that can be visualized during the optimization process. This visualization leads to greater interpretability of the relationship between the covariates and the response relative to conventional neural networks. The model is shown to perform well in a number of contexts including prediction of new data and recovery of the true underlying functional weights; these results were confirmed through real applications and simulation studies. A forthcoming R package is developed on top of a popular deep learning library (Keras) allowing for general use of the approach.
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We propose a two-sample testing procedure based on learned deep neural network representations. To this end, we define two test statistics that perform an asymptotic location test on data samples mapped onto a hidden layer. The tests are consistent and asymptotically control the type-1 error rate. Their test statistics can be evaluated in linear time (in the sample size). Suitable data representations are obtained in a data-driven way, by solving a supervised or unsupervised transfer-learning task on an auxiliary (potentially distinct) data set. If no auxiliary data is available, we split the data into two chunks: one for learning representations and one for computing the test statistic. In experiments on audio samples, natural images and three-dimensional neuroimaging data our tests yield significant decreases in type-2 error rate (up to 35 percentage points) compared to state-of-the-art two-sample tests such as kernel-methods and classifier two-sample tests.
We propose a class of kernel-based two-sample tests, which aim to determine whether two sets of samples are drawn from the same distribution. Our tests are constructed from kernels parameterized by deep neural nets, trained to maximize test power. These tests adapt to variations in distribution smoothness and shape over space, and are especially suited to high dimensions and complex data. By contrast, the simpler kernels used in prior kernel testing work are spatially homogeneous, and adaptive only in lengthscale. We explain how this scheme includes popular classifier-based two-sample tests as a special case, but improves on them in general. We provide the first proof of consistency for the proposed adaptation method, which applies both to kernels on deep features and to simpler radial basis kernels or multiple kernel learning. In experiments, we establish the superior performance of our deep kernels in hypothesis testing on benchmark and real-world data. The code of our deep-kernel-based two sample tests is available at https://github.com/fengliu90/DK-for-TST.
Deep Gaussian Processes (DGP) are hierarchical generalizations of Gaussian Processes (GP) that have proven to work effectively on a multiple supervised regression tasks. They combine the well calibrated uncertainty estimates of GPs with the great flexibility of multilayer models. In DGPs, given the inputs, the outputs of the layers are Gaussian distributions parameterized by their means and covariances. These layers are realized as Sparse GPs where the training data is approximated using a small set of pseudo points. In this work, we show that the computational cost of DGPs can be reduced with no loss in performance by using a separate, smaller set of pseudo points when calculating the layerwise variance while using a larger set of pseudo points when calculating the layerwise mean. This enabled us to train larger models that have lower cost and better predictive performance.
We develop a functional encoder-decoder approach to supervised meta-learning, where labeled data is encoded into an infinite-dimensional functional representation rather than a finite-dimensional one. Furthermore, rather than directly producing the representation, we learn a neural update rule resembling functional gradient descent which iteratively improves the representation. The final representation is used to condition the decoder to make predictions on unlabeled data. Our approach is the first to demonstrates the success of encoder-decoder style meta-learning methods like conditional neural processes on large-scale few-shot classification benchmarks such as miniImageNet and tieredImageNet, where it achieves state-of-the-art performance.
We introduce a framework for Continual Learning (CL) based on Bayesian inference over the function space rather than the parameters of a deep neural network. This method, referred to as functional regularisation for Continual Learning, avoids forgetting a previous task by constructing and memorising an approximate posterior belief over the underlying task-specific function. To achieve this we rely on a Gaussian process obtained by treating the weights of the last layer of a neural network as random and Gaussian distributed. Then, the training algorithm sequentially encounters tasks and constructs posterior beliefs over the task-specific functions by using inducing point sparse Gaussian process methods. At each step a new task is first learnt and then a summary is constructed consisting of (i) inducing inputs -- a fixed-size subset of the task inputs selected such that it optimally represents the task -- and (ii) a posterior distribution over the function values at these inputs. This summary then regularises learning of future tasks, through Kullback-Leibler regularisation terms. Our method thus unites approaches focused on (pseudo-)rehearsal with those derived from a sequential Bayesian inference perspective in a principled way, leading to strong results on accepted benchmarks.
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