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Register a new userLeveraging the Exact Likelihood of Deep Latent Variable Models
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Deep latent variable models (DLVMs) combine the approximation abilities of deep neural networks and the statistical foundations of generative models. Variational methods are commonly used for inference; however, the exact likelihood of these models has been largely overlooked. The purpose of this work is to study the general properties of this quantity and to show how they can be leveraged in practice. We focus on important inferential problems that rely on the likelihood: estimation and missing data imputation. First, we investigate maximum likelihood estimation for DLVMs: in particular, we show that most unconstrained models used for continuous data have an unbounded likelihood function. This problematic behaviour is demonstrated to be a source of mode collapse. We also show how to ensure the existence of maximum likelihood estimates, and draw useful connections with nonparametric mixture models. Finally, we describe an algorithm for missing data imputation using the exact conditional likelihood of a deep latent variable model. On several data sets, our algorithm consistently and significantly outperforms the usual imputation scheme used for DLVMs.
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Deep kernel learning (DKL) leverages the connection between Gaussian process (GP) and neural networks (NN) to build an end-to-end, hybrid model. It combines the capability of NN to learn rich representations under massive data and the non-parametric property of GP to achieve automatic regularization that incorporates a trade-off between model fit and model complexity. However, the deterministic encoder may weaken the model regularization of the following GP part, especially on small datasets, due to the free latent representation. We therefore present a complete deep latent-variable kernel learning (DLVKL) model wherein the latent variables perform stochastic encoding for regularized representation. We further enhance the DLVKL from two aspects: (i) the expressive variational posterior through neural stochastic differential equation (NSDE) to improve the approximation quality, and (ii) the hybrid prior taking knowledge from both the SDE prior and the posterior to arrive at a flexible trade-off. Intensive experiments imply that the DLVKL-NSDE performs similarly to the well calibrated GP on small datasets, and outperforms existing deep GPs on large datasets.
Fitting a graphical model to a collection of random variables given sample observations is a challenging task if the observed variables are influenced by latent variables, which can induce significant confounding statistical dependencies among the observed variables. We present a new convex relaxation framework based on regularized conditional likelihood for latent-variable graphical modeling in which the conditional distribution of the observed variables conditioned on the latent variables is given by an exponential family graphical model. In comparison to previously proposed tractable methods that proceed by characterizing the marginal distribution of the observed variables, our approach is applicable in a broader range of settings as it does not require knowledge about the specific form of distribution of the latent variables and it can be specialized to yield tractable approaches to problems in which the observed data are not well-modeled as Gaussian. We demonstrate the utility and flexibility of our framework via a series of numerical experiments on synthetic as well as real data.
In many scientific problems such as video surveillance, modern genomic analysis, and clinical studies, data are often collected from diverse domains across time that exhibit time-dependent heterogeneous properties. It is important to not only integrate data from multiple sources (called multiview data), but also to incorporate time dependency for deep understanding of the underlying system. Latent factor models are popular tools for exploring multi-view data. However, it is frequently observed that these models do not perform well for complex systems and they are not applicable to time-series data. Therefore, we propose a generative model based on variational autoencoder and recurrent neural network to infer the latent dynamic factors for multivariate timeseries data. This approach allows us to identify the disentangled latent embeddings across multiple modalities while accounting for the time factor. We invoke our proposed model for analyzing three datasets on which we demonstrate the effectiveness and the interpretability of the model.
A simple and widely adopted approach to extend Gaussian processes (GPs) to multiple outputs is to model each output as a linear combination of a collection of shared, unobserved latent GPs. An issue with this approach is choosing the number of latent processes and their kernels. These choices are typically done manually, which can be time consuming and prone to human biases. We propose Gaussian Process Automatic Latent Process Selection (GP-ALPS), which automatically chooses the latent processes by turning off those that do not meaningfully contribute to explaining the data. We develop a variational inference scheme, assess the quality of the variational posterior by comparing it against the gold standard MCMC, and demonstrate the suitability of GP-ALPS in a set of preliminary experiments.
Although with progress in introducing auxiliary amortized inference models, learning discrete latent variable models is still challenging. In this paper, we show that the annoying difficulty of obtaining reliable stochastic gradients for the inference model and the drawback of indirectly optimizing the target log-likelihood can be gracefully addressed in a new method based on stochastic approximation (SA) theory of the Robbins-Monro type. Specifically, we propose to directly maximize the target log-likelihood and simultaneously minimize the inclusive divergence between the posterior and the inference model. The resulting learning algorithm is called joint SA (JSA). To the best of our knowledge, JSA represents the first method that couples an SA version of the EM (expectation-maximization) algorithm (SAEM) with an adaptive MCMC procedure. Experiments on several benchmark generative modeling and structured prediction tasks show that JSA consistently outperforms recent competitive algorithms, with faster convergence, better final likelihoods, and lower variance of gradient estimates.
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