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Register a new userCommon ancestor type distribution: a Moran model and its deterministic limit
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Authors
Fernando Cordero
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We study the common ancestor type distribution in a $2$-type Moran model with population size $N$, mutation and selection, and in the deterministic limit regime arising in the former when $N$ tends to infinity, without any rescaling of parameters or time. In the finite case, we express the common ancestor type distribution as a weighted sum of combinatorial terms, and we show that the latter converges to an explicit function. Next, we recover the previous results through pruning of the ancestral selection graph (ASG). The notions of relevant ASG, finite and asymptotic pruned lookdown ASG permit to achieve this task.
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We consider a Moran model with two allelic types, mutation and selection. In this work, we study the behaviour of the proportion of fit individuals when the size of the population tends to infinity, without any rescaling of parameters or time. We first prove that the latter converges, uniformly in compacts in probability, to the solution of an ordinary differential equation, which is explicitly solved. Next, we study the stability properties of its equilibrium points. Moreover, we show that the fluctuations of the proportion of fit individuals, after a proper normalization, satisfy a uniform central limit theorem in $[0,infty)$. As a consequence, we deduce the convergence of the corresponding stationary distributions.
Using graphical methods based on a `lookdown and pruned version of the {em ancestral selection graph}, we obtain a representation of the type distribution of the ancestor in a two-type Wright-Fisher population with mutation and selection, conditional on the overall type frequency in the old population. This extends results from Lenz, Kluth, Baake, and Wakolbinger (Theor. Pop. Biol., 103 (2015), 27-37) to the case of heavy-tailed offspring, directed by a reproduction measure $Lambda$. The representation is in terms of the equilibrium tail probabilities of the line-counting process $L$ of the graph. We identify a strong pathwise Siegmund dual of $L$, and characterise the equilibrium tail probabilities of $L$ in terms of hitting probabilities of the dual process.
In a (two-type) Wright-Fisher diffusion with directional selection and two-way mutation, let $x$ denote todays frequency of the beneficial type, and given $x$, let $h(x)$ be the probability that, among all individuals of todays population, the individual whose progeny will eventually take over in the population is of the beneficial type. Fearnhead [Fearnhead, P., 2002. The common ancestor at a nonneutral locus. J. Appl. Probab. 39, 38-54] and Taylor [Taylor, J. E., 2007. The common ancestor process for a Wright-Fisher diffusion. Electron. J. Probab. 12, 808-847] obtained a series representation for $h(x)$. We develop a construction that contains elements of both the ancestral selection graph and the lookdown construction and includes pruning of certain lines upon mutation. Besides being interesting in its own right, this construction allows a transparent derivation of the series coefficients of $h(x)$ and gives them a probabilistic meaning.
If we follow an asexually reproducing population through time, then the amount of time that has passed since the most recent common ancestor (MRCA) of all current individuals lived will change as time progresses. The resulting MRCA age process has been studied previously when the population has a constant large size and evolves via the diffusion limit of standard Wright--Fisher dynamics. For any population model, the sample paths of the MRCA age process are made up of periods of linear upward drift with slope +1 punctuated by downward jumps. We build other Markov processes that have such paths from Poisson point processes on $mathbb{R}_{++}timesmathbb{R}_{++}$ with intensity measures of the form $lambdaotimesmu$ where $lambda$ is Lebesgue measure, and $mu$ (the family lifetime measure) is an arbitrary, absolutely continuous measure satisfying $mu((0,infty))=infty$ and $mu((x,infty))<infty$ for all $x>0$. Special cases of this construction describe the time evolution of the MRCA age in $(1+beta)$-stable continuous state branching processes conditioned on nonextinction--a particular case of which, $beta=1$, is Fellers continuous state branching process conditioned on nonextinction. As well as the continuous time process, we also consider the discrete time Markov chain that records the value of the continuous process just before and after its successive jumps. We find transition probabilities for both the continuous and discrete time processes, determine when these processes are transient and recurrent and compute stationary distributions when they exist.
We consider the Moran model in continuous time with two types, mutation, and selection. We concentrate on the ancestral line and its stationary type distribution. Building on work by Fearnhead (J. Appl. Prob. 39 (2002), 38-54) and Taylor (Electron. J. Probab. 12 (2007), 808-847), we characterise this distribution via the fixation probability of the offspring of all individuals of favourable type (regardless of the offsprings types). We concentrate on a finite population and stay with the resulting discrete setting all the way through. This way, we extend previous results and gain new insight into the underlying particle picture.
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