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Register a new userClassification with Low Rank and Missing Data
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Added by
Roi Livni
Publication date
2015
fields
Informatics Engineering
and research's language is
English
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We consider classification and regression tasks where we have missing data and assume that the (clean) data resides in a low rank subspace. Finding a hidden subspace is known to be computationally hard. Nevertheless, using a non-proper formulation we give an efficient agnostic algorithm that classifies as good as the best linear classifier coupled with the best low-dimensional subspace in which the data resides. A direct implication is that our algorithm can linearly (and non-linearly through kernels) classify provably as well as the best classifier that has access to the full data.
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Missing values challenge data analysis because many supervised and unsupervised learning methods cannot be applied directly to incomplete data. Matrix completion based on low-rank assumptions are very powerful solution for dealing with missing values. However, existing methods do not consider the case of informative missing values which are widely encountered in practice. This paper proposes matrix completion methods to recover Missing Not At Random (MNAR) data. Our first contribution is to suggest a model-based estimation strategy by modelling the missing mechanism distribution. An EM algorithm is then implemented, involving a Fast Iterative Soft-Thresholding Algorithm (FISTA). Our second contribution is to suggest a computationally efficient surrogate estimation by implicitly taking into account the joint distribution of the data and the missing mechanism: the data matrix is concatenated with the mask coding for the missing values; a low-rank structure for exponential family is assumed on this new matrix, in order to encode links between variables and missing mechanisms. The methodology that has the great advantage of handling different missing value mechanisms is robust to model specification errors.The performances of our methods are assessed on the real data collected from a trauma registry (TraumaBase ) containing clinical information about over twenty thousand severely traumatized patients in France. The aim is then to predict if the doctors should administrate tranexomic acid to patients with traumatic brain injury, that would limit excessive bleeding.
Matrix completion is a modern missing data problem where both the missing structure and the underlying parameter are high dimensional. Although missing structure is a key component to any missing data problems, existing matrix completion methods often assume a simple uniform missing mechanism. In this work, we study matrix completion from corrupted data under a novel low-rank missing mechanism. The probability matrix of observation is estimated via a high dimensional low-rank matrix estimation procedure, and further used to complete the target matrix via inverse probabilities weighting. Due to both high dimensional and extreme (i.e., very small) nature of the true probability matrix, the effect of inverse probability weighting requires careful study. We derive optimal asymptotic convergence rates of the proposed estimators for both the observation probabilities and the target matrix.
Deep learning models have become state of the art for natural language processing (NLP) tasks, however deploying these models in production system poses significant memory constraints. Existing compression methods are either lossy or introduce significant latency. We propose a compression method that leverages low rank matrix factorization during training,to compress the word embedding layer which represents the size bottleneck for most NLP models. Our models are trained, compressed and then further re-trained on the downstream task to recover accuracy while maintaining the reduced size. Empirically, we show that the proposed method can achieve 90% compression with minimal impact in accuracy for sentence classification tasks, and outperforms alternative methods like fixed-point quantization or offline word embedding compression. We also analyze the inference time and storage space for our method through FLOP calculations, showing that we can compress DNN models by a configurable ratio and regain accuracy loss without introducing additional latency compared to fixed point quantization. Finally, we introduce a novel learning rate schedule, the Cyclically Annealed Learning Rate (CALR), which we empirically demonstrate to outperform other popular adaptive learning rate algorithms on a sentence classification benchmark.
Feature selection (FS) is an important research topic in machine learning. Usually, FS is modelled as a+ bi-objective optimization problem whose objectives are: 1) classification accuracy; 2) number of features. One of the main issues in real-world applications is missing data. Databases with missing data are likely to be unreliable. Thus, FS performed on a data set missing some data is also unreliable. In order to directly control this issue plaguing the field, we propose in this study a novel modelling of FS: we include reliability as the third objective of the problem. In order to address the modified problem, we propose the application of the non-dominated sorting genetic algorithm-III (NSGA-III). We selected six incomplete data sets from the University of California Irvine (UCI) machine learning repository. We used the mean imputation method to deal with the missing data. In the experiments, k-nearest neighbors (K-NN) is used as the classifier to evaluate the feature subsets. Experimental results show that the proposed three-objective model coupled with NSGA-III efficiently addresses the FS problem for the six data sets included in this study.
What learning algorithms can be run directly on compressively-sensed data? In this work, we consider the question of accurately and efficiently computing low-rank matrix or tensor factorizations given data compressed via random projections. We examine the approach of first performing factorization in the compressed domain, and then reconstructing the original high-dimensional factors from the recovered (compressed) factors. In both the matrix and tensor settings, we establish conditions under which this natural approach will provably recover the original factors. While it is well-known that random projections preserve a number of geometric properties of a dataset, our work can be viewed as showing that they can also preserve certain solutions of non-convex, NP-Hard problems like non-negative matrix factorization. We support these theoretical results with experiments on synthetic data and demonstrate the practical applicability of compressed factorization on real-world gene expression and EEG time series datasets.
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