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Combining machine learning and data assimilation to forecast dynamical systems from noisy partial observations

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 Added by Georg Gottwald A.
 Publication date 2021
and research's language is English




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We present a supervised learning method to learn the propagator map of a dynamical system from partial and noisy observations. In our computationally cheap and easy-to-implement framework a neural network consisting of random feature maps is trained sequentially by incoming observations within a data assimilation procedure. By employing Takens embedding theorem, the network is trained on delay coordinates. We show that the combination of random feature maps and data assimilation, called RAFDA, outperforms standard random feature maps for which the dynamics is learned using batch data.

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Data-driven prediction and physics-agnostic machine-learning methods have attracted increased interest in recent years achieving forecast horizons going well beyond those to be expected for chaotic dynamical systems. In a separate strand of research data-assimilation has been successfully used to optimally combine forecast models and their inherent uncertainty with incoming noisy observations. The key idea in our work here is to achieve increased forecast capabilities by judiciously combining machine-learning algorithms and data assimilation. We combine the physics-agnostic data-driven approach of random feature maps as a forecast model within an ensemble Kalman filter data assimilation procedure. The machine-learning model is learned sequentially by incorporating incoming noisy observations. We show that the obtained forecast model has remarkably good forecast skill while being computationally cheap once trained. Going beyond the task of forecasting, we show that our method can be used to generate reliable ensembles for probabilistic forecasting as well as to learn effective model closure in multi-scale systems.
A novel method, based on the combination of data assimilation and machine learning is introduced. The new hybrid approach is designed for a two-fold scope: (i) emulating hidden, possibly chaotic, dynamics and (ii) predicting their future states. The method consists in applying iteratively a data assimilation step, here an ensemble Kalman filter, and a neural network. Data assimilation is used to optimally combine a surrogate model with sparse noisy data. The output analysis is spatially complete and is used as a training set by the neural network to update the surrogate model. The two steps are then repeated iteratively. Numerical experiments have been carried out using the chaotic 40-variables Lorenz 96 model, proving both convergence and statistical skill of the proposed hybrid approach. The surrogate model shows short-term forecast skill up to two Lyapunov times, the retrieval of positive Lyapunov exponents as well as the more energetic frequencies of the power density spectrum. The sensitivity of the method to critical setup parameters is also presented: the forecast skill decreases smoothly with increased observational noise but drops abruptly if less than half of the model domain is observed. The successful synergy between data assimilation and machine learning, proven here with a low-dimensional system, encourages further investigation of such hybrids with more sophisticated dynamics.
We study, using simulated experiments inspired by thin film magnetic domain patterns, the feasibility of phase retrieval in X-ray diffractive imaging in the presence of intrinsic charge scattering given only photon-shot-noise limited diffraction data. We detail a reconstruction algorithm to recover the samples magnetization distribution under such conditions, and compare its performance with that of Fourier transform holography. Concerning the design of future experiments, we also chart out the reconstruction limits of diffractive imaging when photon- shot-noise and the intensity of charge scattering noise are independently varied. This work is directly relevant to the time-resolved imaging of magnetic dynamics using coherent and ultrafast radiation from X-ray free electron lasers and also to broader classes of diffractive imaging experiments which suffer noisy data, missing data or both.
We investigate theoretically and numerically the use of the Least-Squares Finite-element method (LSFEM) to approach data-assimilation problems for the steady-state, incompressible Navier-Stokes equations. Our LSFEM discretization is based on a stress-velocity-pressure (S-V-P) first-order formulation, using discrete counterparts of the Sobolev spaces $H({rm div}) times H^1 times L^2$ respectively. Resolution of the system is via minimization of a least-squares functional representing the magnitude of the residual of the equations. A simple and immediate approach to extend this solver to data-assimilation is to add a data-discrepancy term to the functional. Whereas most data-assimilation techniques require a large number of evaluations of the forward-simulations and are therefore very expensive, the approach proposed in this work uniquely has the same cost as a single forward run. However, the question arises: what is the statistical model implied by this choice? We answer this within the Bayesian framework, establishing the latent background covariance model and the likelihood. Further we demonstrate that - in the linear case - the method is equivalent to application of the Kalman filter, and derive the posterior covariance. We practically demonstrate the capabilities of our method on a backward-facing step case. Our LSFEM formulation (without data) is shown to have good approximation quality, even on relatively coarse meshes - in particular with respect to mass-conservation and reattachment location. Adding limited velocity measurements from experiment, we show that the method is able to correct for discretization error on very coarse meshes, as well as correct for the influence of unknown and uncertain boundary-conditions.
Despite the success of deep neural networks (DNNs) in image classification tasks, the human-level performance relies on massive training data with high-quality manual annotations, which are expensive and time-consuming to collect. There exist many inexpensive data sources on the web, but they tend to contain inaccurate labels. Training on noisy labeled datasets causes performance degradation because DNNs can easily overfit to the label noise. To overcome this problem, we propose a noise-tolerant training algorithm, where a meta-learning update is performed prior to conventional gradient update. The proposed meta-learning method simulates actual training by generating synthetic noisy labels, and train the model such that after one gradient update using each set of synthetic noisy labels, the model does not overfit to the specific noise. We conduct extensive experiments on the noisy CIFAR-10 dataset and the Clothing1M dataset. The results demonstrate the advantageous performance of the proposed method compared to several state-of-the-art baselines.

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