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Register a new userSleep Staging Based on Multi Scale Dual Attention Network
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Huafeng Wang
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Sleep staging plays an important role on the diagnosis of sleep disorders. In general, experts classify sleep stages manually based on polysomnography (PSG), which is quite time-consuming. Meanwhile, the acquisition process of multiple signals is much complex, which can affect the subjects sleep. Therefore, the use of single-channel electroencephalogram (EEG) for automatic sleep staging has become a popular research topic. In the literature, a large number of sleep staging methods based on single-channel EEG have been proposed with promising results and achieve the preliminary automation of sleep staging. However, the performance for most of these methods in the N1 stage do not satisfy the needs of the diagnosis. In this paper, we propose a deep learning model multi scale dual attention network(MSDAN) based on raw EEG, which utilizes multi-scale convolution to extract features in different waveforms contained in the EEG signal, connects channel attention and spatial attention mechanisms in series to filter and highlight key information, and uses soft thresholding to remove redundant information. Experiments were conducted using two datasets with 5-fold cross-validation and hold-out validation method. The final average accuracy, overall accuracy, macro F1 score and Cohens Kappa coefficient of the model reach 96.70%, 91.74%, 0.8231 and 0.8723 on the Sleep-EDF dataset, 96.14%, 90.35%, 0.7945 and 0.8284 on the Sleep-EDFx dataset. Significantly, our model performed superiorly in the N1 stage, with F1 scores of 54.41% and 52.79% on the two datasets respectively. The results show the superiority of our network over the existing methods, reaching a new state-of-the-art. In particular, the proposed method achieves excellent results in the N1 sleep stage compared to other methods.
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Sleep staging is fundamental for sleep assessment and disease diagnosis. Although previous attempts to classify sleep stages have achieved high classification performance, several challenges remain open: 1) How to effectively extract salient waves in multimodal sleep data; 2) How to capture the multi-scale transition rules among sleep stages; 3) How to adaptively seize the key role of specific modality for sleep staging. To address these challenges, we propose SalientSleepNet, a multimodal salient wave detection network for sleep staging. Specifically, SalientSleepNet is a temporal fully convolutional network based on the $rm U^2$-Net architecture that is originally proposed for salient object detection in computer vision. It is mainly composed of two independent $rm U^2$-like streams to extract the salient features from multimodal data, respectively. Meanwhile, the multi-scale extraction module is designed to capture multi-scale transition rules among sleep stages. Besides, the multimodal attention module is proposed to adaptively capture valuable information from multimodal data for the specific sleep stage. Experiments on the two datasets demonstrate that SalientSleepNet outperforms the state-of-the-art baselines. It is worth noting that this model has the least amount of parameters compared with the existing deep neural network models.
Background: Despite recent significant progress in the development of automatic sleep staging methods, building a good model still remains a big challenge for sleep studies with a small cohort due to the data-variability and data-inefficiency issues. This work presents a deep transfer learning approach to overcome these issues and enable transferring knowledge from a large dataset to a small cohort for automatic sleep staging. Methods: We start from a generic end-to-end deep learning framework for sequence-to-sequence sleep staging and derive two networks as the means for transfer learning. The networks are first trained in the source domain (i.e. the large database). The pretrained networks are then finetuned in the target domain (i.e. the small cohort) to complete knowledge transfer. We employ the Montreal Archive of Sleep Studies (MASS) database consisting of 200 subjects as the source domain and study deep transfer learning on three different target domains: the Sleep Cassette subset and the Sleep Telemetry subset of the Sleep-EDF Expanded database, and the Surrey-cEEGrid database. The target domains are purposely adopted to cover different degrees of data mismatch to the source domains. Results: Our experimental results show significant performance improvement on automatic sleep staging on the target domains achieved with the proposed deep transfer learning approach. Conclusions: These results suggest the efficacy of the proposed approach in addressing the above-mentioned data-variability and data-inefficiency issues. Significance: As a consequence, it would enable one to improve the quality of automatic sleep staging models when the amount of data is relatively small. The source code and the pretrained models are available at http://github.com/pquochuy/sleep_transfer_learning.
EEG signals are usually simple to obtain but expensive to label. Although supervised learning has been widely used in the field of EEG signal analysis, its generalization performance is limited by the amount of annotated data. Self-supervised learning (SSL), as a popular learning paradigm in computer vision (CV) and natural language processing (NLP), can employ unlabeled data to make up for the data shortage of supervised learning. In this paper, we propose a self-supervised contrastive learning method of EEG signals for sleep stage classification. During the training process, we set up a pretext task for the network in order to match the right transformation pairs generated from EEG signals. In this way, the network improves the representation ability by learning the general features of EEG signals. The robustness of the network also gets improved in dealing with diverse data, that is, extracting constant features from changing data. In detail, the networks performance depends on the choice of transformations and the amount of unlabeled data used in the training process of self-supervised learning. Empirical evaluations on the Sleep-edf dataset demonstrate the competitive performance of our method on sleep staging (88.16% accuracy and 81.96% F1 score) and verify the effectiveness of SSL strategy for EEG signal analysis in limited labeled data regimes. All codes are provided publicly online.
We propose an end-to-end trainable Convolutional Neural Network (CNN), named GridDehazeNet, for single image dehazing. The GridDehazeNet consists of three modules: pre-processing, backbone, and post-processing. The trainable pre-processing module can generate learned inputs with better diversity and more pertinent features as compared to those derived inputs produced by hand-selected pre-processing methods. The backbone module implements a novel attention-based multi-scale estimation on a grid network, which can effectively alleviate the bottleneck issue often encountered in the conventional multi-scale approach. The post-processing module helps to reduce the artifacts in the final output. Experimental results indicate that the GridDehazeNet outperforms the state-of-the-arts on both synthetic and real-world images. The proposed hazing method does not rely on the atmosphere scattering model, and we provide an explanation as to why it is not necessarily beneficial to take advantage of the dimension reduction offered by the atmosphere scattering model for image dehazing, even if only the dehazing results on synthetic images are concerned.
Classifying limb movements using brain activity is an important task in Brain-computer Interfaces (BCI) that has been successfully used in multiple application domains, ranging from human-computer interaction to medical and biomedical applications. This paper proposes a novel solution for classification of left/right hand movement by exploiting a Long Short-Term Memory (LSTM) network with attention mechanism to learn the electroencephalogram (EEG) time-series information. To this end, a wide range of time and frequency domain features are extracted from the EEG signals and used to train an LSTM network to perform the classification task. We conduct extensive experiments with the EEG Movement dataset and show that our proposed solution our method achieves improvements over several benchmarks and state-of-the-art methods in both intra-subject and cross-subject validation schemes. Moreover, we utilize the proposed framework to analyze the information as received by the sensors and monitor the activated regions of the brain by tracking EEG topography throughout the experiments.
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