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Register a new userThiols in the ISM: first detection of HC(O)SH and confirmation of C$_2$H$_5$SH
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Added by
Lucas F. Rodr\\'iguez-Almeida
Publication date
2021
fields
Physics
and research's language is
English
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The chemical compounds carrying the thiol group (-SH) have been considered essential in recent prebiotic studies regarding the polymerization of amino acids. We have searched for this kind of compounds toward the Galactic Centre quiescent cloud G+0.693-0.027. We report the first detection in the interstellar space of the trans-isomer of monothioformic acid (t-HC(O)SH) with an abundance of $sim,$1$,times,$10$^{-10}$. Additionally, we provide a solid confirmation of the gauche isomer of ethyl mercaptan (g-C$_2$H$_5$SH) with an abundance of $sim,$3$,times,$10$^{-10}$, and we also detect methyl mercaptan (CH$_3$SH) with an abundance of $sim,$5$,times,$10$^{-9}$. Abundance ratios were calculated for the three SH-bearing species and their OH-analogues, revealing similar trends between alcohols and thiols with increasing complexity. Possible chemical routes for the interstellar synthesis of t-HC(O)SH, CH$_3$SH and C$_2$H$_5$SH are discussed, as well as the relevance of these compounds in the synthesis of prebiotic proteins in the primitive Earth.
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The rate constants for the formation, destruction, and collisional excitation of SH$^+$ are calculated from quantum mechanical approaches using two new SH$_2^+$ potential energy surfaces (PESs) of $^4A$ and $^2A$ electronic symmetry. The PESs were developed to describe all adiabatic states correlating to the SH$^+$ ($^3Sigma^-$) + H($^2S$) channel. The formation of SH$^+$ through the S$^+$ + H$_2$ reaction is endothermic by $approx$ 9860 K, and requires at least two vibrational quanta on the H$_2$ molecule to yield significant reactivity. Quasi-classical calculations of the total formation rate constant for H$_2$($v=2$) are in very good agreement with the quantum results above 100K. Further quasi-classical calculations are then performed for $v=3$, 4, and 5 to cover all vibrationally excited H$_2$ levels significantly populated in dense photodissociation regions (PDR). The new calculated formation and destruction rate constants are two to six times larger than the previous ones and have been introduced in the Meudon PDR code to simulate the physical and illuminating conditions in the Orion bar prototypical PDR. New astrochemical models based on the new molecular data produce four times larger SH$^+$ column densities, in agreement with those inferred from recent ALMA observations of the Orion bar.
We have extended the pure rotational investigation of the two isomers syn and anti vinyl mercaptan to the millimeter domain using a frequency-multiplication spectrometer. The species were produced by a radiofrequency discharge in 1,2-ethanedithiol. Additional transitions have been re-measured in the centimeter band using Fourier-transform microwave spectroscopy to better determine rest frequencies of transitions with low-$J$ and low-$K_a$ values. Experimental investigations were supported by quantum chemical calculations on the energetics of both the [C$_2$,H$_4$,S] and [C$_2$,H$_4$,O] isomeric families. Interstellar searches for both syn and anti vinyl mercaptan as well as vinyl alcohol were performed in the EMoCA (Exploring Molecular Complexity with ALMA) spectral line survey carried out toward Sagittarius (Sgr) B2(N2) with the Atacama Large Millimeter/submillimeter Array (ALMA). Highly accurate experimental frequencies (to better than 100 kHz accuracy) for both syn and anti isomers of vinyl mercaptan have been measured up to 250 GHz; these deviate considerably from predictions based on extrapolation of previous microwave measurements. Reliable frequency predictions of the astronomically most interesting millimeter-wave lines for these two species can now be derived from the best-fit spectroscopic constants. From the energetic investigations, the four lowest singlet isomers of the [C$_2$,H$_4$,S] family are calculated to be nearly isoenergetic, which makes this family a fairly unique test bed for assessing possible reaction pathways. Upper limits for the column density of syn and anti vinyl mercaptan are derived toward the extremely molecule-rich star-forming region Sgr B2(N2) enabling comparison with selected complex organic molecules.
The $1 ^3Sigma_u^- leftarrow X^3Sigma_g^-$ transition of linear HC$_5$H (A) has been observed in a neon matrix and gas phase. The assignment is based on mass-selective experiments, extrapolation of previous results of the longer HC$_{2n+1}$H homologues, and density functional and multi-state CASPT2 theoretical methods. Another band system starting at 303 nm in neon is assigned as the $1 ^1 A_1 leftarrow X ^1 A_1$ transition of the cumulene carbene pentatetraenylidene H$_2$C$_5$ (B).
Little is known about the chemistry of isocyanates (compounds with the functional group R-N=C=O) in the interstellar medium, as only four of them have been detected so far: isocyanate radical (NCO), isocyanic acid (HNCO), N-protonated isocyanic acid (H$_2$NCO$^+$) and methyl isocyanate (CH$_3$NCO). The molecular cloud G+0.693-0.027, located in the Galactic Centre, represents an excellent candidate to search for new isocyanates since it exhibits high abundances of the simplest ones, HNCO and CH$_3$NCO. After CH$_3$NCO, the next complex isocyanates are ethyl isocyanate (C$_2$H$_5$NCO) and vinyl isocyanate (C$_2$H$_3$NCO). Their detection in the ISM would enhance our understanding of the formation of these compounds in space. We have detected C$_2$H$_5$NCO and H$_2$NCO$^+$ towards G+0.693-0.027 (the former for the first time in the interstellar medium) with molecular abundances of (4.7$-$7.3)$times$10$^{-11}$ and (1.0$-$1.5)$times$10$^{-11}$, respectively. A ratio CH$_3$NCO / C$_2$H$_5$NCO = 8$pm$1 is obtained; therefore the relative abundance determined for HNCO:CH$_3$NCO:C$_2$H$_5$NCO is 1:1/55:1/447, which implies a decrease by more than one order of magnitude going progressively from HNCO to CH$_3$NCO and to C$_2$H$_5$NCO. This is similar to what has been found for e.g. alcohols and thiols and suggests that C$_2$H$_5$NCO is likely formed on the surface of dust grains. In addition, we have obtained column density ratios of HNCO / NCO > 269, HNCO / H$_2$NCO$^+$ $sim$ 2100 and C$_2$H$_3$NCO / C$_2$H$_5$NCO~<~4. A comparison of the Methyl~/~Ethyl ratios for isocyanates (-NCO), alcohols (-OH), formiates (HCOO-), nitriles (-CN) and thiols (-SH) is performed and shows that ethyl-derivatives may be formed more efficiently for the N-bearing molecules than for the O- and S-bearing molecules.
SH$^+$ is a surprisingly widespread molecular ion in diffuse interstellar clouds. There, it plays an important role triggering the sulfur chemistry. In addition, SH$^+$ emission lines have been detected at the UV-illuminated edges of dense molecular clouds, mbox{so-called} photo-dissociation regions (PDRs), and toward high-mass protostars. An accurate determination of the SH$^+$ abundance and of the physical conditions prevailing in these energetic environments relies on knowing the rate coefficients of inelastic collisions between SH$^+$ molecules and hydrogen atoms, hydrogen molecules, and electrons. In this paper, we derive SH$^+$--H fine and hyperfine-resolved rate coefficients from the recent quantum calculations for the SH$^+$--H collisions, including inelastic, exchange and reactive processes. The method used is based on the infinite order sudden approach. State-to-state rate coefficients between the first 31 fine levels and 61 hyperfine levels of SH$^+$ were obtained for temperatures ranging from 10 to 1000 K. Fine structure-resolved rate coefficients present a strong propensity rule in favour of $Delta j = Delta N$ transitions. The $Delta j = Delta F$ propensity rule is observed for the hyperfine transitions. {The new rate coefficients will help significantly in the interpretation of SH$^+$ spectra from PDRs and UV-irradiated shocks where the abundance of hydrogen atoms with respect to hydrogen molecules can be significant.
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