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Machine Learning Based Molecular Index Modulation

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 Added by Ozgur Kara
 Publication date 2021
and research's language is English




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As the promise of molecular communication via diffusion systems at nano-scale communication increases, designing molecular schemes robust to the inevitable effects of molecular interference has become of vital importance. We propose a novel approach of a CNN-based neural network architecture for a uniquely-designed molecular multiple-input-single-output topology in order to alleviate the damaging effects of molecular interference. In this study, we compare the performance of the proposed network with a naive-approach index modulation scheme and symbol-by-symbol maximum likelihood estimation with respect to bit error rate, and demonstrate that the proposed method yields better performance.

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Molecular communication via diffusion (MCvD) is a molecular communication method that utilizes the free diffusion of carrier molecules to transfer information at the nano-scale. Due to the random propagation of carrier molecules, inter-symbol interference (ISI) is a major issue in an MCvD system. Alongside ISI, inter-link interference (ILI) is also an issue that increases the total interference for MCvD-based multiple-input-multiple-output (MIMO) approaches. Inspired by the antenna index modulation (IM) concept in traditional communication systems, this paper introduces novel IM-based transmission schemes for MCvD systems. In the paper, molecular space shift keying (MSSK) is proposed as a novel modulation for molecular MIMO systems, and it is found that this method combats ISI and ILI considerably better than existing MIMO approaches. For nano-machines that have access to two different molecules, the direct extension of MSSK, quadrature molecular space shift keying (QMSSK) is also proposed. QMSSK is found to combat ISI considerably well whilst not performing well against ILI-caused errors. In order to combat ILI more effectively, another dual-molecule-based novel modulation scheme called the molecular spatial modulation (MSM) is proposed. Combined with the Gray mapping imposed on the antenna indices, MSM is observed to yield reliable error rates for molecular MIMO systems.
A molecular communication channel is determined by the received signal. Received signal models form the basis for studies focused on modulation, receiver design, capacity, and coding depend on the received signal models. Therefore, it is crucial to model the number of received molecules until time $t$ analytically. Modeling the diffusion-based molecular communication channel with the first-hitting process is an open issue for a spherical transmitter. In this paper, we utilize the artificial neural networks technique to model the received signal for a spherical transmitter and a perfectly absorbing receiver (i.e., first hitting process). The proposed technique may be utilized in other studies that assume a spherical transmitter instead of a point transmitter.
137 - Tong Wu , Huan Zhao , Fanxin Liu 2019
A Boltzmann machine whose effective temperature can be dynamically cooled provides a stochastic neural network realization of simulated annealing, which is an important metaheuristic for solving combinatorial or global optimization problems with broad applications in machine intelligence and operations research. However, the hardware realization of the Boltzmann stochastic element with cooling capability has never been achieved within an individual semiconductor device. Here we demonstrate a new memristive device concept based on two-dimensional material heterostructures that enables this critical stochastic element in a Boltzmann machine. The dynamic cooling effect in simulated annealing can be emulated in this multi-terminal memristive device through electrostatic bias with sigmoidal thresholding distributions. We also show that a machine-learning-based method is efficient for device-circuit co-design of the Boltzmann machine based on the stochastic memristor devices in simulated annealing. The experimental demonstrations of the tunable stochastic memristors combined with the machine-learning-based device-circuit co-optimization approach for stochastic-memristor-based neural-network circuits chart a pathway for the efficient hardware realization of stochastic neural networks with applications in a broad range of electronics and computing disciplines.
Memristor crossbars are circuits capable of performing analog matrix-vector multiplications, overcoming the fundamental energy efficiency limitations of digital logic. They have been shown to be effective in special-purpose accelerators for a limited set of neural network applications. We present the Programmable Ultra-efficient Memristor-based Accelerator (PUMA) which enhances memristor crossbars with general purpose execution units to enable the acceleration of a wide variety of Machine Learning (ML) inference workloads. PUMAs microarchitecture techniques exposed through a specialized Instruction Set Architecture (ISA) retain the efficiency of in-memory computing and analog circuitry, without compromising programmability. We also present the PUMA compiler which translates high-level code to PUMA ISA. The compiler partitions the computational graph and optimizes instruction scheduling and register allocation to generate code for large and complex workloads to run on thousands of spatial cores. We have developed a detailed architecture simulator that incorporates the functionality, timing, and power models of PUMAs components to evaluate performance and energy consumption. A PUMA accelerator running at 1 GHz can reach area and power efficiency of $577~GOPS/s/mm^2$ and $837~GOPS/s/W$, respectively. Our evaluation of diverse ML applications from image recognition, machine translation, and language modelling (5M-800M synapses) shows that PUMA achieves up to $2,446times$ energy and $66times$ latency improvement for inference compared to state-of-the-art GPUs. Compared to an application-specific memristor-based accelerator, PUMA incurs small energy overheads at similar inference latency and added programmability.
This survey paper focuses on modulation aspects of molecular communication, an emerging field focused on building biologically-inspired systems that embed data within chemical signals. The primary challenges in designing these systems are how to encode and modulate information onto chemical signals, and how to design a receiver that can detect and decode the information from the corrupted chemical signal observed at the destination. In this paper, we focus on modulation design for molecular communication via diffusion systems. In these systems, chemical signals are transported using diffusion, possibly assisted by flow, from the transmitter to the receiver. This tutorial presents recent advancements in modulation and demodulation schemes for molecular communication via diffusion. We compare five different modulation types: concentration-based, type-based, timing-based, spatial, and higher-order modulation techniques. The end-to-end system designs for each modulation scheme are presented. In addition, the key metrics used in the literature to evaluate the performance of these techniques are also presented. Finally, we provide a numerical bit error rate comparison of prominent modulation techniques using analytical models. We close the tutorial with a discussion of key open issues and future research directions for design of molecular communication via diffusion systems.
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