Subscribe to the gold package and get unlimited access to Shamra Academy
Register a new userControlling cell motion and microscale flow with polarized light fields
83
0
0.0
(
0
)
Ask ChatGPT about the research
No Arabic abstract
We investigate how light polarization affects the motion of photo-responsive algae, textit{Euglena gracilis}. In a uniformly polarized field, cells swim approximately perpendicular to the polarization direction and form a nematic state with zero mean velocity. When light polarization varies spatially, cell motion is modulated by local polarization. In such light fields, cells exhibit complex spatial distribution and motion patterns which are controlled by topological properties of the underlying fields; we further show that ordered cell swimming can generate directed transporting fluid flow. Experimental results are quantitatively reproduced by an active Brownian particle model in which particle motion direction is nematically coupled to local light polarization.
rate research
Read More
In a system of noisy self-propelled particles with interactions that favor directional alignment, collective motion will appear if the density of particles increases beyond a certain threshold. In this paper, we argue that such a threshold may depend also on the profiles of the perturbation in the particle directions. Specifically, we perform mean-field, linear stability, perturbative and numerical analyses on an approximated form of the Fokker-Planck equation describing the system. We find that if an angular perturbation to an initially homogeneous system is large in magnitude and highly localized in space, it will be amplified and thus serves as an indication of the onset of collective motion. Our results also demonstrate that high particle speed promotes collective motion.
We present a quantitative analysis on the response of a dilute active suspension of self-propelled rods (swimmers) in a planar channel subjected to an imposed shear flow. To best capture the salient features of shear-induced effects, we consider the case of an imposed Couette flow, providing a constant shear rate across the channel. We argue that the steady-state behavior of swimmers can be understood in the light of a population splitting phenomenon, occurring as the shear rate exceeds a certain threshold, initiating the reversal of swimming direction for a finite fraction of swimmers from down- to upstream or vice versa, depending on swimmer position within the channel. Swimmers thus split into two distinct, statistically significant and oppositely swimming majority and minority populations. The onset of population splitting translates into a transition from a self-propulsion-dominated regime to a shear-dominated regime, corresponding to a unimodal-to-bimodal change in the probability distribution function of the swimmer orientation. We present a phase diagram in terms of the swim and flow Peclet numbers showing the separation of these two regimes by a discontinuous transition line. Our results shed further light on the behavior of swimmers in a shear flow and provide an explanation for the previously reported non-monotonic behavior of the mean, near-wall, parallel-to-flow orientation of swimmers with increasing shear strength.
Many cell membrane proteins that bind to actin form dynamic clusters driven by contractile flows generated by the actomyosin machinery at the cell cortex. Recent evidence suggests that a necessary condition for the generation of these protein clusters on the membrane is the stratified organization of the active agents -formin-nucleated actin, myosin-II minifilaments, and ARP2/3-nucleated actin mesh -within the cortex. Further, the observation that these clusters dynamically remodel, requires that the components of this active machinery undergo turnover. Here we develop a coarse-grained agent-based Brownian dynamics simulation that incorporates the effects of stratification, binding of myosin minifilaments to multiple actin filaments and their turnover. We show that these three features of the active cortical machinery -stratification, multivalency and turnover -are critical for the realisation of a nonequilibrium steady state characterised by contractile flows and dynamic orientational patterning. We show that this nonequilibrium steady state enabled by the above features of the cortex, can facilitate multi-particle encounters of membrane proteins that profoundly influence the kinetics of bimolecular reactions at the cell surface.
We study the steady-state behavior of active, dipolar, Brownian spheroids in a planar channel subjected to an imposed Couette flow and an external transverse field, applied in the downward normal-to-flow direction. The field-induced torque on active spheroids (swimmers) is taken to be of magnetic form by assuming that they have a permanent magnetic dipole moment, pointing along their self-propulsion (swim) direction. Using a continuum approach, we show that a host of behaviors emerge over the parameter space spanned by the particle aspect ratio, self-propulsion and shear/field strengths, and the channel width. The cross-stream migration of the model swimmers is shown to involve a regime of linear response (quantified by a linear-response factor) in weak fields. For prolate swimmers, the weak-field behavior crosses over to a regime of full swimmer migration to the bottom half of the channel in strong fields. For oblate swimmers, a counterintuitive regime of reverse migration arises in intermediate fields, where a macroscopic fraction of swimmers reorient and swim to the top channel half at an acute `upward angle relative to the field axis. The diverse behaviors reported here are analyzed based on the shear-induced population splitting (bimodality) of the swim orientation, giving two distinct, oppositely polarized, swimmer subpopulations (albeit very differently for prolate/oblate swimmers) in each channel half. In strong fields, swimmers of both types exhibit net upstream currents relative to the laboratory frame. The onsets of full migration and net upstream current depend on the aspect ratio, enabling efficient particle separation strategies in microfluidic setups.
We use a continuum model to report on the behavior of a dilute suspension of chiral swimmers subject to externally imposed shear in a planar channel. Swimmer orientation in response to the imposed shear can be characterized by two distinct phases of behavior, corresponding to unimodal or bimodal distribution functions for swimmer orientation along the channel. These phases indicate the occurrence (or not) of a population splitting phenomenon changing the swimming direction of a macroscopic fraction of active particles to the exact opposite of that dictated by the imposed flow. We present a detailed quantitative analysis elucidating the complexities added to the population splitting behavior of swimmers when they are chiral. In particular, the transition from unimodal to bimodal and vice versa are shown to display a re-entrant behavior across the parameter space spanned by varying the chiral angular speed. We also present the notable effects of particle aspect ratio and self-propulsion speed on system phase behavior and discuss potential implications of our results in applications such as swimmer separation/sorting.
Log in to be able to interact and post comments
comments
Fetching comments
Sign in to be able to follow your search criteria
