No Arabic abstract
Facilitated by the recent advances of Machine Learning (ML), the automated design of optimization heuristics is currently shaking up evolutionary computation (EC). Where the design of hand-picked guidelines for choosing a most suitable heuristic has long dominated research activities in the field, automatically trained heuristics are now seen to outperform human-derived choices even for well-researched optimization tasks. ML-based EC is therefore not any more a futuristic vision, but has become an integral part of our community. A key criticism that ML-based heuristics are often faced with is their potential lack of explainability, which may hinder future developments. This applies in particular to supervised learning techniques which extrapolate algorithms performance based on exploratory landscape analysis (ELA). In such applications, it is not uncommon to use dozens of problem features to build the models underlying the specific algorithm selection or configuration task. Our goal in this work is to analyze whether this many features are indeed needed. Using the classification of the BBOB test functions as testbed, we show that a surprisingly small number of features -- often less than four -- can suffice to achieve a 98% accuracy. Interestingly, the number of features required to meet this threshold is found to decrease with the problem dimension. We show that the classification accuracy transfers to settings in which several instances are involved in training and testing. In the leave-one-instance-out setting, however, classification accuracy drops significantly, and the transformation-invariance of the features becomes a decisive success factor.
The electroencephalographic (EEG) signals provide highly informative data on brain activities and functions. However, their heterogeneity and high dimensionality may represent an obstacle for their interpretation. The introduction of a priori knowledge seems the best option to mitigate high dimensionality problems, but could lose some information and patterns present in the data, while data heterogeneity remains an open issue that often makes generalization difficult. In this study, we propose a genetic algorithm (GA) for feature selection that can be used with a supervised or unsupervised approach. Our proposal considers three different fitness functions without relying on expert knowledge. Starting from two publicly available datasets on cognitive workload and motor movement/imagery, the EEG signals are processed, normalized and their features computed in the time, frequency and time-frequency domains. The feature vector selection is performed by applying our GA proposal and compared with two benchmarking techniques. The results show that different combinations of our proposal achieve better results in respect to the benchmark in terms of overall performance and feature reduction. Moreover, the proposed GA, based on a novel fitness function here presented, outperforms the benchmark when the two different datasets considered are merged together, showing the effectiveness of our proposal on heterogeneous data.
This paper extends the runtime analysis of non-elitist evolutionary algorithms (EAs) with fitness-proportionate selection from the simple OneMax function to the linear functions. Not only does our analysis cover a larger class of fitness functions, it also holds for a wider range of mutation rates. We show that with overwhelmingly high probability, no linear function can be optimised in less than exponential time, assuming bitwise mutation rate $Theta(1/n)$ and population size $lambda=n^k$ for any constant $k>2$. In contrast to this negative result, we also show that for any linear function with polynomially bounded weights, the EA achieves a polynomial expected runtime if the mutation rate is reduced to $Theta(1/n^2)$ and the population size is sufficiently large. Furthermore, the EA with mutation rate $chi/n=Theta(1/n)$ and modest population size $lambda=Omega(ln n)$ optimises the scaled fitness function $e^{(chi+varepsilon)f(x)}$ for any linear function $f$ and any $varepsilon>0$ in expected time $O(nlambdalnlambda+n^2)$. These upper bounds also extend to some additively decomposed fitness functions, such as the Royal Road functions. We expect that the obtained results may be useful not only for the development of the theory of evolutionary algorithms, but also for biological applications, such as the directed evolution.
We introduce a new method of performing high dimensional discriminant analysis, which we call multiDA. We achieve this by constructing a hybrid model that seamlessly integrates a multiclass diagonal discriminant analysis model and feature selection components. Our feature selection component naturally simplifies to weights which are simple functions of likelihood ratio statistics allowing natural comparisons with traditional hypothesis testing methods. We provide heuristic arguments suggesting desirable asymptotic properties of our algorithm with regards to feature selection. We compare our method with several other approaches, showing marked improvements in regard to prediction accuracy, interpretability of chosen features, and algorithm run time. We demonstrate such strengths of our model by showing strong classification performance on publicly available high dimensional datasets, as well as through multiple simulation studies. We make an R package available implementing our approach.
In this paper, we study the application of sparse principal component analysis (PCA) to clustering and feature selection problems. Sparse PCA seeks sparse factors, or linear combinations of the data variables, explaining a maximum amount of variance in the data while having only a limited number of nonzero coefficients. PCA is often used as a simple clustering technique and sparse factors allow us here to interpret the clusters in terms of a reduced set of variables. We begin with a brief introduction and motivation on sparse PCA and detail our implementation of the algorithm in dAspremont et al. (2005). We then apply these results to some classic clustering and feature selection problems arising in biology.
Audio signals are often represented as spectrograms and treated as 2D images. In this light, deep convolutional architectures are widely used for music audio tasks even though these two data types have very different structures. In this work, we attempt to open the black-box on deep convolutional models to inform future architectures for music audio tasks, and explain the excellent performance of deep convolutions that model spectrograms as 2D images. To this end, we expand recent explainability discussions in deep learning for natural image data to music audio data through systematic experiments using the deep features learned by various convolutional architectures. We demonstrate that deep convolutional features perform well across various target tasks, whether or not they are extracted from deep architectures originally trained on that task. Additionally, deep features exhibit high similarity to hand-crafted wavelet features, whether the deep features are extracted from a trained or untrained model.