Subscribe to the gold package and get unlimited access to Shamra Academy
Register a new userEndoL2H: Deep Super-Resolution for Capsule Endoscopy
72
0
0.0
(
0
)
Added by
Abdulkadir Gokce
Publication date
2020
fields
Informatics Engineering
and research's language is
English
Ask ChatGPT about the research
No Arabic abstract
Although wireless capsule endoscopy is the preferred modality for diagnosis and assessment of small bowel diseases, the poor camera resolution is a substantial limitation for both subjective and automated diagnostics. Enhanced-resolution endoscopy has shown to improve adenoma detection rate for conventional endoscopy and is likely to do the same for capsule endoscopy. In this work, we propose and quantitatively validate a novel framework to learn a mapping from low-to-high resolution endoscopic images. We combine conditional adversarial networks with a spatial attention block to improve the resolution by up to factors of 8x, 10x, 12x, respectively. Quantitative and qualitative studies performed demonstrate the superiority of EndoL2H over state-of-the-art deep super-resolution methods DBPN, RCAN and SRGAN. MOS tests performed by 30 gastroenterologists qualitatively assess and confirm the clinical relevance of the approach. EndoL2H is generally applicable to any endoscopic capsule system and has the potential to improve diagnosis and better harness computational approaches for polyp detection and characterization. Our code and trained models are available at https://github.com/CapsuleEndoscope/EndoL2H.
rate research
Read More
Current capsule endoscopes and next-generation robotic capsules for diagnosis and treatment of gastrointestinal diseases are complex cyber-physical platforms that must orchestrate complex software and hardware functions. The desired tasks for these systems include visual localization, depth estimation, 3D mapping, disease detection and segmentation, automated navigation, active control, path realization and optional therapeutic modules such as targeted drug delivery and biopsy sampling. Data-driven algorithms promise to enable many advanced functionalities for capsule endoscopes, but real-world data is challenging to obtain. Physically-realistic simulations providing synthetic data have emerged as a solution to the development of data-driven algorithms. In this work, we present a comprehensive simulation platform for capsule endoscopy operations and introduce VR-Caps, a virtual active capsule environment that simulates a range of normal and abnormal tissue conditions (e.g., inflated, dry, wet etc.) and varied organ types, capsule endoscope designs (e.g., mono, stereo, dual and 360{deg}camera), and the type, number, strength, and placement of internal and external magnetic sources that enable active locomotion. VR-Caps makes it possible to both independently or jointly develop, optimize, and test medical imaging and analysis software for the current and next-generation endoscopic capsule systems. To validate this approach, we train state-of-the-art deep neural networks to accomplish various medical image analysis tasks using simulated data from VR-Caps and evaluate the performance of these models on real medical data. Results demonstrate the usefulness and effectiveness of the proposed virtual platform in developing algorithms that quantify fractional coverage, camera trajectory, 3D map reconstruction, and disease classification.
The single image super-resolution task is one of the most examined inverse problems in the past decade. In the recent years, Deep Neural Networks (DNNs) have shown superior performance over alternative methods when the acquisition process uses a fixed known downsampling kernel-typically a bicubic kernel. However, several recent works have shown that in practical scenarios, where the test data mismatch the training data (e.g. when the downsampling kernel is not the bicubic kernel or is not available at training), the leading DNN methods suffer from a huge performance drop. Inspired by the literature on generalized sampling, in this work we propose a method for improving the performance of DNNs that have been trained with a fixed kernel on observations acquired by other kernels. For a known kernel, we design a closed-form correction filter that modifies the low-resolution image to match one which is obtained by another kernel (e.g. bicubic), and thus improves the results of existing pre-trained DNNs. For an unknown kernel, we extend this idea and propose an algorithm for blind estimation of the required correction filter. We show that our approach outperforms other super-resolution methods, which are designed for general downsampling kernels.
Classic image scaling (e.g. bicubic) can be seen as one convolutional layer and a single upscaling filter. Its implementation is ubiquitous in all display devices and image processing software. In the last decade deep learning systems have been introduced for the task of image super-resolution (SR), using several convolutional layers and numerous filters. These methods have taken over the benchmarks of image quality for upscaling tasks. Would it be possible to replace classic upscalers with deep learning architectures on edge devices such as display panels, tablets, laptop computers, etc.? On one hand, the current trend in Edge-AI chips shows a promising future in this direction, with rapid development of hardware that can run deep-learning tasks efficiently. On the other hand, in image SR only few architectures have pushed the limit to extreme small sizes that can actually run on edge devices at real-time. We explore possible solutions to this problem with the aim to fill the gap between classic upscalers and small deep learning configurations. As a transition from classic to deep-learning upscaling we propose edge-SR (eSR), a set of one-layer architectures that use interpretable mechanisms to upscale images. Certainly, a one-layer architecture cannot reach the quality of deep learning systems. Nevertheless, we find that for high speed requirements, eSR becomes better at trading-off image quality and runtime performance. Filling the gap between classic and deep-learning architectures for image upscaling is critical for massive adoption of this technology. It is equally important to have an interpretable system that can reveal the inner strategies to solve this problem and guide us to future improvements and better understanding of larger networks.
Modern solutions to the single image super-resolution (SISR) problem using deep neural networks aim not only at better performance accuracy but also at a lighter and computationally efficient model. To that end, recently, neural architecture search (NAS) approaches have shown some tremendous potential. Following the same underlying, in this paper, we suggest a novel trilevel NAS method that provides a better balance between different efficiency metrics and performance to solve SISR. Unlike available NAS, our search is more complete, and therefore it leads to an efficient, optimized, and compressed architecture. We innovatively introduce a trilevel search space modeling, i.e., hierarchical modeling on network-, cell-, and kernel-level structures. To make the search on trilevel spaces differentiable and efficient, we exploit a new sparsestmax technique that is excellent at generating sparse distributions of individual neural architecture candidates so that they can be better disentangled for the final selection from the enlarged search space. We further introduce the sorting technique to the sparsestmax relaxation for better network-level compression. The proposed NAS optimization additionally facilitates simultaneous search and training in a single phase, reducing search time and train time. Comprehensive evaluations on the benchmark datasets show our methods clear superiority over the state-of-the-art NAS in terms of a good trade-off between model size, performance, and efficiency.
Reference-based Super-Resolution (Ref-SR) has recently emerged as a promising paradigm to enhance a low-resolution (LR) input image by introducing an additional high-resolution (HR) reference image. Existing Ref-SR methods mostly rely on implicit correspondence matching to borrow HR textures from reference images to compensate for the information loss in input images. However, performing local transfer is difficult because of two gaps between input and reference images: the transformation gap (e.g. scale and rotation) and the resolution gap (e.g. HR and LR). To tackle these challenges, we propose C2-Matching in this work, which produces explicit robust matching crossing transformation and resolution. 1) For the transformation gap, we propose a contrastive correspondence network, which learns transformation-robust correspondences using augmented views of the input image. 2) For the resolution gap, we adopt a teacher-student correlation distillation, which distills knowledge from the easier HR-HR matching to guide the more ambiguous LR-HR matching. 3) Finally, we design a dynamic aggregation module to address the potential misalignment issue. In addition, to faithfully evaluate the performance of Ref-SR under a realistic setting, we contribute the Webly-Referenced SR (WR-SR) dataset, mimicking the practical usage scenario. Extensive experiments demonstrate that our proposed C2-Matching significantly outperforms state of the arts by over 1dB on the standard CUFED5 benchmark. Notably, it also shows great generalizability on WR-SR dataset as well as robustness across large scale and rotation transformations.
suggested questions
Log in to be able to interact and post comments
comments
Fetching comments
Sign in to be able to follow your search criteria
