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Register a new userMutual Information Maximization in Graph Neural Networks
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Pengqian Yu
Publication date
2019
fields
Informatics Engineering
and research's language is
English
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A variety of graph neural networks (GNNs) frameworks for representation learning on graphs have been recently developed. These frameworks rely on aggregation and iteration scheme to learn the representation of nodes. However, information between nodes is inevitably lost in the scheme during learning. In order to reduce the loss, we extend the GNNs frameworks by exploring the aggregation and iteration scheme in the methodology of mutual information. We propose a new approach of enlarging the normal neighborhood in the aggregation of GNNs, which aims at maximizing mutual information. Based on a series of experiments conducted on several benchmark datasets, we show that the proposed approach improves the state-of-the-art performance for four types of graph tasks, including supervised and semi-supervised graph classification, graph link prediction and graph edge generation and classification.
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The richness in the content of various information networks such as social networks and communication networks provides the unprecedented potential for learning high-quality expressive representations without external supervision. This paper investigates how to preserve and extract the abundant information from graph-structured data into embedding space in an unsupervised manner. To this end, we propose a novel concept, Graphical Mutual Information (GMI), to measure the correlation between input graphs and high-level hidden representations. GMI generalizes the idea of conventional mutual information computations from vector space to the graph domain where measuring mutual information from two aspects of node features and topological structure is indispensable. GMI exhibits several benefits: First, it is invariant to the isomorphic transformation of input graphs---an inevitable constraint in many existing graph representation learning algorithms; Besides, it can be efficiently estimated and maximized by current mutual information estimation methods such as MINE; Finally, our theoretical analysis confirms its correctness and rationality. With the aid of GMI, we develop an unsupervised learning model trained by maximizing GMI between the input and output of a graph neural encoder. Considerable experiments on transductive as well as inductive node classification and link prediction demonstrate that our method outperforms state-of-the-art unsupervised counterparts, and even sometimes exceeds the performance of supervised ones.
Graph neural networks (GNNs) have been shown with superior performance in various applications, but training dedicated GNNs can be costly for large-scale graphs. Some recent work started to study the pre-training of GNNs. However, none of them provide theoretical insights into the design of their frameworks, or clear requirements and guarantees towards the transferability of GNNs. In this work, we establish a theoretically grounded and practically useful framework for the transfer learning of GNNs. Firstly, we propose a novel view towards the essential graph information and advocate the capturing of it as the goal of transferable GNN training, which motivates the design of Ours, a novel GNN framework based on ego-graph information maximization to analytically achieve this goal. Secondly, we specify the requirement of structure-respecting node features as the GNN input, and derive a rigorous bound of GNN transferability based on the difference between the local graph Laplacians of the source and target graphs. Finally, we conduct controlled synthetic experiments to directly justify our theoretical conclusions. Extensive experiments on real-world networks towards role identification show consistent results in the rigorously analyzed setting of direct-transfering, while those towards large-scale relation prediction show promising results in the more generalized and practical setting of transfering with fine-tuning.
Graph Neural Networks (GNNs) achieve an impressive performance on structured graphs by recursively updating the representation vector of each node based on its neighbors, during which parameterized transformation matrices should be learned for the node feature updating. However, existing propagation schemes are far from being optimal since they do not fully utilize the relational information between nodes. We propose the information maximizing graph neural networks (IGNN), which maximizes the mutual information between edge states and transform parameters. We reformulate the mutual information as a differentiable objective via a variational approach. We compare our model against several recent variants of GNNs and show that our model achieves the state-of-the-art performance on multiple tasks including quantum chemistry regression on QM9 dataset, generalization capability from QM9 to larger molecular graphs, and prediction of molecular bioactivities relevant for drug discovery. The IGNN model is based on an elegant and fundamental idea in information theory as explained in the main text, and it could be easily generalized beyond the contexts of molecular graphs considered in this work. To encourage more future work in this area, all datasets and codes used in this paper will be released for public access.
Bipartite graph embedding has recently attracted much attention due to the fact that bipartite graphs are widely used in various application domains. Most previous methods, which adopt random walk-based or reconstruction-based objectives, are typically effective to learn local graph structures. However, the global properties of bipartite graph, including community structures of homogeneous nodes and long-range dependencies of heterogeneous nodes, are not well preserved. In this paper, we propose a bipartite graph embedding called BiGI to capture such global properties by introducing a novel local-global infomax objective. Specifically, BiGI first generates a global representation which is composed of two prototype representations. BiGI then encodes sampled edges as local representations via the proposed subgraph-level attention mechanism. Through maximizing the mutual information between local and global representations, BiGI enables nodes in bipartite graph to be globally relevant. Our model is evaluated on various benchmark datasets for the tasks of top-K recommendation and link prediction. Extensive experiments demonstrate that BiGI achieves consistent and significant improvements over state-of-the-art baselines. Detailed analyses verify the high effectiveness of modeling the global properties of bipartite graph.
Mutual information is widely applied to learn latent representations of observations, whilst its implication in classification neural networks remain to be better explained. We show that optimising the parameters of classification neural networks with softmax cross-entropy is equivalent to maximising the mutual information between inputs and labels under the balanced data assumption. Through experiments on synthetic and real datasets, we show that softmax cross-entropy can estimate mutual information approximately. When applied to image classification, this relation helps approximate the point-wise mutual information between an input image and a label without modifying the network structure. To this end, we propose infoCAM, informative class activation map, which highlights regions of the input image that are the most relevant to a given label based on differences in information. The activation map helps localise the target object in an input image. Through experiments on the semi-supervised object localisation task with two real-world datasets, we evaluate the effectiveness of our information-theoretic approach.
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