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We present TurbuStat (v1.0): a Python package for computing turbulence statistics in spectral-line data cubes. TurbuStat includes implementations of fourteen methods for recovering turbulent properties from observational data. Additional features of the software include: distance metrics for comparing two data sets; a segmented linear model for fitting lines with a break-point; a two-dimensional elliptical power-law model; multi-core fast-fourier-transform support; a suite for producing simulated observations of fractional Brownian Motion fields, including two-dimensional images and optically-thin HI data cubes; and functions for creating realistic world coordinate system information for synthetic observations. This paper summarizes the TurbuStat package and provides representative examples using several different methods. TurbuStat is an open-source package and we welcome community feedback and contributions.
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We introduce GraSPy, a Python library devoted to statistical inference, machine learning, and visualization of random graphs and graph populations. This package provides flexible and easy-to-use algorithms for analyzing and understanding graphs with a scikit-learn compliant API. GraSPy can be downloaded from Python Package Index (PyPi), and is released under the Apache 2.0 open-source license. The documentation and all releases are available at https://neurodata.io/graspy.
The Montage image mosaic engine has found wide applicability in astronomy research, integration into processing environments, and is an examplar application for the development of advanced cyber-infrastructure. It is written in C to provide performance and portability. Linking C/C++ libraries to the Python kernel at run time as binary extensions allows them to run under Python at compiled speeds and enables users to take advantage of all the functionality in Python. We have built Python binary extensions of the 59 ANSI-C modules that make up version 5 of the Montage toolkit. This has involved a turning the code into a C library, with driver code fully separated to reproduce the calling sequence of the command-line tools; and then adding Python and C linkage code with the Cython library, which acts as a bridge between general C libraries and the Python interface. We will demonstrate how to use these Python binary extensions to perform image processing, including reprojecting and resampling images, rectifying background emission to a common level, creation of image mosaics that preserve the calibration and astrometric fidelity of the input images, creating visualizations with an adaptive stretch algorithm, processing HEALPix images, and analyzing and managing image metadata.
CASA, the Common Astronomy Software Applications, is the primary data processing software for the Atacama Large Millimeter/submillimeter Array (ALMA) and the Karl G. Jansky Very Large Array (VLA), and is often used also for other radio telescopes. CASA has always been distributed as a single, integrated application, including a Python interpreter and all the libraries, packages and modules. As part of the ongoing development of CASA 6, and the switch from Python 2 to 3, CASA will provide greater flexibility for users to integrate CASA into existing Python workflows by using a modular architecture and standard pip wheel installation. These proceedings of the 2019 Astronomical Data Analysis Software & Systems (ADASS) conference will give an overview of the CASA 6 project.
Photometry of moving sources typically suffers from reduced signal-to-noise (SNR) or flux measurements biased to incorrect low values through the use of circular apertures. To address this issue we present the software package, TRIPPy: TRailed Image Photometry in Python. TRIPPy introduces the pill aperture, which is the natural extension of the circular aperture appropriate for linearly trailed sources. The pill shape is a rectangle with two semicircular end-caps, and is described by three parameters, the trail length and angle, and the radius. The TRIPPy software package also includes a new technique to generate accurate model point-spread functions (PSF) and trailed point-spread functions (TSF) from stationary background sources in sidereally tracked images. The TSF is merely the convolution of the model PSF, which consists of a moffat profile, and super sampled lookup table. From the TSF, accurate pill aperture corrections can be estimated as a function of pill radius with a accuracy of 10 millimags for highly trailed sources. Analogous to the use of small circular apertures and associated aperture corrections, small radius pill apertures can be used to preserve signal-to-noise of low flux sources, with appropriate aperture correction applied to provide an accurate, unbiased flux measurement at all SNR.
Prior statistical knowledge of the atmospheric turbulence is essential for designing, optimizing and evaluating tomographic adaptive optics systems. We present the statistics of the vertical profiles of $C_N^2$ and the outer scale at Maunakea estimated using a Slope Detection And Ranging (SLODAR) method from on-sky telemetry taken by RAVEN, which is a MOAO demonstrator in the Subaru telescope. In our SLODAR method, the profiles are estimated by a fit of the theoretical auto- and cross-correlation of measurements from multiple Shack-Haltmann wavefront sensors to the observed correlations via the non-linear Levenberg-Marquardt Algorithm (LMA), and the analytic derivatives of the spatial phase structure function with respect to its parameters for the LMA are also developed. The estimated profile has the median total seeing of 0.460$^{primeprime}$ and large $C_N^2$ fraction of the ground layer of 54.3%. The $C_N^2$ profile has a good agreement with the result from literatures, except for the ground layer. The median value of the outer scale is 25.5m and the outer scale is larger at higher altitudes, and these trends of the outer scale are consistent with findings in literatures.
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