Subscribe to the gold package and get unlimited access to Shamra Academy
Register a new userGraph Convolutional Neural Networks via Motif-based Attention
134
0
0.0
(
0
)
Added by
Qiran Gong
Publication date
2018
fields
Informatics Engineering
and research's language is
English
Ask ChatGPT about the research
No Arabic abstract
Many real-world problems can be represented as graph-based learning problems. In this paper, we propose a novel framework for learning spatial and attentional convolution neural networks on arbitrary graphs. Different from previous convolutional neural networks on graphs, we first design a motif-matching guided subgraph normalization method to capture neighborhood information. Then we implement subgraph-level self-attentional layers to learn different importances from different subgraphs to solve graph classification problems. Analogous to image-based attentional convolution networks that operate on locally connected and weighted regions of the input, we also extend graph normalization from one-dimensional node sequence to two-dimensional node grid by leveraging motif-matching, and design self-attentional layers without requiring any kinds of cost depending on prior knowledge of the graph structure. Our results on both bioinformatics and social network datasets show that we can significantly improve graph classification benchmarks over traditional graph kernel and existing deep models.
rate research
Read More
Graph convolutional neural networks (GCNs) embed nodes in a graph into Euclidean space, which has been shown to incur a large distortion when embedding real-world graphs with scale-free or hierarchical structure. Hyperbolic geometry offers an exciting alternative, as it enables embeddings with much smaller distortion. However, extending GCNs to hyperbolic geometry presents several unique challenges because it is not clear how to define neural network operations, such as feature transformation and aggregation, in hyperbolic space. Furthermore, since input features are often Euclidean, it is unclear how to transform the features into hyperbolic embeddings with the right amount of curvature. Here we propose Hyperbolic Graph Convolutional Neural Network (HGCN), the first inductive hyperbolic GCN that leverages both the expressiveness of GCNs and hyperbolic geometry to learn inductive node representations for hierarchical and scale-free graphs. We derive GCN operations in the hyperboloid model of hyperbolic space and map Euclidean input features to embeddings in hyperbolic spaces with different trainable curvature at each layer. Experiments demonstrate that HGCN learns embeddings that preserve hierarchical structure, and leads to improved performance when compared to Euclidean analogs, even with very low dimensional embeddings: compared to state-of-the-art GCNs, HGCN achieves an error reduction of up to 63.1% in ROC AUC for link prediction and of up to 47.5% in F1 score for node classification, also improving state-of-the art on the Pubmed dataset.
Graph convolution networks have recently garnered a lot of attention for representation learning on non-Euclidean feature spaces. Recent research has focused on stacking multiple layers like in convolutional neural networks for the increased expressive power of graph convolution networks. However, simply stacking multiple graph convolution layers lead to issues like vanishing gradient, over-fitting and over-smoothing. Such problems are much less when using shallower networks, even though the shallow networks have lower expressive power. In this work, we propose a novel Multipath Graph convolutional neural network that aggregates the output of multiple different shallow networks. We train and test our model on various benchmarks datasets for the task of node property prediction. Results show that the proposed method not only attains increased test accuracy but also requires fewer training epochs to converge. The full implementation is available at https://github.com/rangan2510/MultiPathGCN
Link prediction is one of the central problems in graph mining. However, recent studies highlight the importance of higher-order network analysis, where complex structures called motifs are the first-class citizens. We first show that existing link prediction schemes fail to effectively predict motifs. To alleviate this, we establish a general motif prediction problem and we propose several heuristics that assess the chances for a specified motif to appear. To make the scores realistic, our heuristics consider - among others - correlations between links, i.e., the potential impact of some arriving links on the appearance of other links in a given motif. Finally, for highest accuracy, we develop a graph neural network (GNN) architecture for motif prediction. Our architecture offers vertex features and sampling schemes that capture the rich structural properties of motifs. While our heuristics are fast and do not need any training, GNNs ensure highest accuracy of predicting motifs, both for dense (e.g., k-cliques) and for sparse ones (e.g., k-stars). We consistently outperform the best available competitor by more than 10% on average and up to 32% in area under the curve. Importantly, the advantages of our approach over schemes based on uncorrelated link prediction increase with the increasing motif size and complexity. We also successfully apply our architecture for predicting more arbitrary clusters and communities, illustrating its potential for graph mining beyond motif analysis.
Graph convolutional network (GCN) is generalization of convolutional neural network (CNN) to work with arbitrarily structured graphs. A binary adjacency matrix is commonly used in training a GCN. Recently, the attention mechanism allows the network to learn a dynamic and adaptive aggregation of the neighborhood. We propose a new GCN model on the graphs where edges are characterized in multiple views or precisely in terms of multiple relationships. For instance, in chemical graph theory, compound structures are often represented by the hydrogen-depleted molecular graph where nodes correspond to atoms and edges correspond to chemical bonds. Multiple attributes can be important to characterize chemical bonds, such as atom pair (the types of atoms that a bond connects), aromaticity, and whether a bond is in a ring. The different attributes lead to different graph representations for the same molecule. There is growing interests in both chemistry and machine learning fields to directly learn molecular properties of compounds from the molecular graph, instead of from fingerprints predefined by chemists. The proposed GCN model, which we call edge attention-based multi-relational GCN (EAGCN), jointly learns attention weights and node features in graph convolution. For each bond attribute, a real-valued attention matrix is used to replace the binary adjacency matrix. By designing a dictionary for the edge attention, and forming the attention matrix of each molecule by looking up the dictionary, the EAGCN exploits correspondence between bonds in different molecules. The prediction of compound properties is based on the aggregated node features, which is independent of the varying molecule (graph) size. We demonstrate the efficacy of the EAGCN on multiple chemical datasets: Tox21, HIV, Freesolv, and Lipophilicity, and interpret the resultant attention weights.
During the image acquisition process, noise is usually added to the data mainly due to physical limitations of the acquisition sensor, and also regarding imprecisions during the data transmission and manipulation. In that sense, the resultant image needs to be processed to attenuate its noise without losing details. Non-learning-based strategies such as filter-based and noise prior modeling have been adopted to solve the image denoising problem. Nowadays, learning-based denoising techniques showed to be much more effective and flexible approaches, such as Residual Convolutional Neural Networks. Here, we propose a new learning-based non-blind denoising technique named Attention Residual Convolutional Neural Network (ARCNN), and its extension to blind denoising named Flexible Attention Residual Convolutional Neural Network (FARCNN). The proposed methods try to learn the underlying noise expectation using an Attention-Residual mechanism. Experiments on public datasets corrupted by different levels of Gaussian and Poisson noise support the effectiveness of the proposed approaches against some state-of-the-art image denoising methods. ARCNN achieved an overall average PSNR results of around 0.44dB and 0.96dB for Gaussian and Poisson denoising, respectively FARCNN presented very consistent results, even with slightly worsen performance compared to ARCNN.
suggested questions
Log in to be able to interact and post comments
comments
Fetching comments
Sign in to be able to follow your search criteria
