BiconeDrag is a software package that allows one to perform a flow field based data processing of dynamic interfacial rheology data pertaining to surfactant laden air-fluid interfaces obtained by means of a rotational bicone shear rheometer. MATLAB and Pyth
Hydrodynamic interactions as modeled by Multi-Particle Collision Dynamics can dramatically influence the dynamics of fully flexible, ring-shaped polymers in ways not known for any other polymer architecture or topology. We show that steady shear leads to an inflation scenario exclusive to ring polymers, which depends not only on Weissenberg number but also on contour length of the ring. By analyzing velocity fields of the solvent around the polymer, we show the existence of a hydrodynamic pocket which allows the polymer to self-stabilize at a certain alignment angle to the flow axis. This self-induced stabilization is accompanied by transitioning of the ring to a non-Brownian particle and a cessation of tumbling. The ring swells significantly in the vorticity direction, and the horseshoe regions on the stretched and swollen ring are effectively locked in place relative to the rings center-of-mass. The observed effect is exclusive to ring polymers and stems from an interplay between hydrodynamic interactions and topology. Furthermore, knots tied onto such rings can serve as additional stabilization anchors. Under strong shear, the knotted section is pulled tight and remains well-localized while tank-treading from one horseshoe region to the opposite one in sudden bursts. We find knotted polymers of high contour length behave very similarly to unknotted rings of the same contour length, but small knotted rings feature a host of different configurations. We propose a filtering technique for rings and chains based on our observations and suggest that strong shear could be used to tighten knots on rings.
We study the motion of a spherical particle driven by a constant volume force in a confined channel with a fixed square cross-section. The channel is filled with a mixture of two liquids under the effect of thermal fluctuations. We use the lattice Boltzmann method to simulate a fluctuating multicomponent fluid in the mixed-phase, and particle-fluid interactions are tuned to reproduce different wetting properties at the particle surface. The numerical set-up is first validated in the absence of thermal fluctuations; to this aim, we quantitatively compute the drift velocity at changing the particle radius and compare it with previous experimental and numerical data. In the presence of thermal fluctuations, we study the fluctuations in the particles velocity at changing thermal energy, applied force, particle size, and particle wettability. The importance of fluctuations with respect to the mean drift velocity is quantitatively assessed, especially in comparison to unconfined situations. Results show that confinement strongly enhances the importance of velocity fluctuations, which can be one order of magnitude larger than what expected in unconfined domains. The observed findings underscore the versatility of the lattice Boltzmann simulations in concrete applications involving the motion of colloidal particles in a highly confined environment in the presence of thermal fluctuations.
Red blood cells (RBCs) -- erythrocytes -- suspended in plasma tend to aggregate and form rouleaux. During aggregation the first stage consists in the formation of RBC doublets [Blood cells, molecules, and diseases 25, 339 (1999)]. While aggregates are normally dissociated by moderate flow stresses, under some pathological conditions the aggregation becomes irreversible, which leads to high blood viscosity and vessel occlusion. We perform here two-dimensional simulations to study the doublet dynamics under shear flow in different conditions and its impact on rheology. We sum up our results on the dynamics of doublet in a rich phase diagram in the parameter space (flow strength, adhesion energy) showing four different types of doublet configurations and dynamics. We find that membrane tank-treading plays an important role in doublet disaggregation, in agreement with experiments on RBCs. A remarkable feature found here is that when a single cell performs tumbling (by increasing vesicle internal viscosity) the doublet formed due to adhesion (even very weak) remains stable even under a very strong shear rate. It is seen in this regime that an increase of shear rate induces an adaptation of the doublet conformation allowing the aggregate to resist cell-cell detachment. We show that the normalized effective viscosity of doublet suspension increases significantly with the adhesion energy, a fact which should affect blood perfusion in microcirculation.
We provide numerical evidence that a Kelvin-Helmholtz instability occurs in the Dirac fluid of electrons in graphene and can be detected in current experiments. This instability appears for electrons in the viscous regime passing though a micrometer-scale obstacle and affects measurements on the time scale of nanoseconds. A possible realization with a needle-shaped obstacle is proposed to produce and detect this instability by measuring the electric potential difference between contact points located before and after the obstacle. We also show that, for our setup, the Kelvin-Helmholtz instability leads to the formation of whirlpools similar to the ones reported in Bandurin et al. [Science 351, 1055 (2016)]. To perform the simulations, we develop a lattice Boltzmann method able to recover the full dissipation in a fluid of massless particles.
There is growing evidence that the flow of driven amorphous solids is not homogeneous, even if the macroscopic stress is constant across the system. Via event driven molecular dynamics simulations of a hard sphere glass, we provide the first direct evidence for a correlation between the fluctuations of the local volume-fraction and the fluctuations of the local shear rate. Higher shear rates do preferentially occur at regions of lower density and vice versa. The temporal behavior of fluctuations is governed by a characteristic time scale, which, when measured in units of strain, is independent of shear rate in the investigated range. Interestingly, the correlation volume is also roughly constant for the same range of shear rates. A possible connection between these two observations is discussed.
Pablo Sanchez-Puga
,Javier Tajuelo
,Juan Manuel Pastor
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(2018)
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"BiconeDrag - A data processing application for the oscillating conical bob interfacial shear rheometer"
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Pablo S\\'anchez-Puga
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