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We develop a Bayesian inference method for diffusions observed discretely and with noise, which is free of discretisation bias. Unlike existing unbiased inference methods, our method does not rely on exact simulation techniques. Instead, our method uses standard time-discretised approximations of diffusions, such as the Euler--Maruyama scheme. Our approach is based on particle marginal Metropolis--Hastings, a particle filter, randomised multilevel Monte Carlo, and importance sampling type correction of approximate Markov chain Monte Carlo. The resulting estimator leads to inference without a bias from the time-discretisation as the number of Markov chain iterations increases. We give convergence results and recommend allocations for algorithm inputs. Our method admits a straightforward parallelisation, and can be computationally efficient. The user-friendly approach is illustrated on three examples, where the underlying diffusion is an Ornstein--Uhlenbeck process, a geometric Brownian motion, and a 2d non-reversible Langevin equation.
We develop clustering procedures for longitudinal trajectories based on a continuous-time hidden Markov model (CTHMM) and a generalized linear observation model. Specifically in this paper, we carry out finite and infinite mixture model-based clustering for a CTHMM and achieve inference using Markov chain Monte Carlo (MCMC). For a finite mixture model with prior on the number of components, we implement reversible-jump MCMC to facilitate the trans-dimensional move between different number of clusters. For a Dirichlet process mixture model, we utilize restricted Gibbs sampling split-merge proposals to expedite the MCMC algorithm. We employ proposed algorithms to the simulated data as well as a real data example, and the results demonstrate the desired performance of the new sampler.
In this paper we present a novel method for estimating the parameters of a parametric diffusion processes. Our approach is based on a closed-form Maximum Likelihood estimator for an approximating Continuous Time Markov Chain (CTMC) of the diffusion process. Unlike typical time discretization approaches, such as psuedo-likelihood approximations with Shoji-Ozaki or Kesslers method, the CTMC approximation introduces no time-discretization error during parameter estimation, and is thus well-suited for typical econometric situations with infrequently sampled data. Due to the structure of the CTMC, we are able to obtain closed-form approximations for the sample likelihood which hold for general univariate diffusions. Comparisons of the state-discretization approach with approximate MLE (time-discretization) and Exact MLE (when applicable) demonstrate favorable performance of the CMTC estimator. Simulated examples are provided in addition to real data experiments with FX rates and constant maturity interest rates.
We consider a pseudo-marginal Metropolis--Hastings kernel $P_m$ that is constructed using an average of $m$ exchangeable random variables, as well as an analogous kernel $P_s$ that averages $s<m$ of these same random variables. Using an embedding technique to facilitate comparisons, we show that the asymptotic variances of ergodic averages associated with $P_m$ are lower bounded in terms of those associated with $P_s$. We show that the bound provided is tight and disprove a conjecture that when the random variables to be averaged are independent, the asymptotic variance under $P_m$ is never less than $s/m$ times the variance under $P_s$. The conjecture does, however, hold when considering continuous-time Markov chains. These results imply that if the computational cost of the algorithm is proportional to $m$, it is often better to set $m=1$. We provide intuition as to why these findings differ so markedly from recent results for pseudo-marginal kernels employing particle filter approximations. Our results are exemplified through two simulation studies; in the first the computational cost is effectively proportional to $m$ and in the second there is a considerable start-up cost at each iteration.
This paper gives a method for computing distributions associated with patterns in the state sequence of a hidden Markov model, conditional on observing all or part of the observation sequence. Probabilities are computed for very general classes of patterns (competing patterns and generalized later patterns), and thus, the theory includes as special cases results for a large class of problems that have wide application. The unobserved state sequence is assumed to be Markovian with a general order of dependence. An auxiliary Markov chain is associated with the state sequence and is used to simplify the computations. Two examples are given to illustrate the use of the methodology. Whereas the first application is more to illustrate the basic steps in applying the theory, the second is a more detailed application to DNA sequences, and shows that the methods can be adapted to include restrictions related to biological knowledge.
Orthogonal Generalized Autoregressive Conditional Heteroskedasticity model (OGARCH) is widely used in finance industry to produce volatility and correlation forecasts. We show that the classic OGARCH model, nevertheless, tends to be too slow in reflecting sudden changes in market condition due to excessive persistence of the integral univariate GARCH processes. To obtain more flexibility to accommodate abrupt market changes, e.g. financial crisis, we extend classic OGARCH model by incorporating a two-state Markov regime-switching GARCH process. This novel construction allows us to capture recurrent systemic regime shifts. Empirical results show that this generalization resolves the problem of excessive persistency effectively and greatly enhances OGARCHs ability to adapt to sudden market breaks while preserving OGARCHs most attractive features such as dimension reduction and multi-step ahead forecasting. By constructing a global minimum variance portfolio (GMVP), we are able to demonstrate significant outperformance of the extended model over the classic OGARCH model and the commonly used Exponentially Weighted Moving Average (EWMA) model. In addition, we show that the extended model is superior to OGARCH and EWMA in terms of predictive accuracy.