No Arabic abstract
Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function. Comparing the persistence diagram of a query with those of a database allows automatic classification or retrieval, but unfortunately, the standard method for comparing persistence diagrams, the bottleneck distance, has a high computational cost. A possible algebraic solution to this problem is to switch to comparisons between the complex polynomials whose roots are the cornerpoints of the persistence diagrams. This strategy allows to reduce the computational cost in a significant way, thereby making persistent homology based applications suitable for large scale databases. The definition of new distances in the polynomial frame-work poses some interesting problems, both of theoretical and practical nature. In this paper, these questions have been addressed by considering possible transformations of the half-plane where the persistence diagrams lie onto the complex plane, and by considering a certain re-normalisation the symmetric functions associated to the polynomial roots of the resulting transformed polynomial. The encouraging numerical results, obtained in a dermatology application test, suggest that the proposed method may even improve the achievements obtained by the standard methods using persistence diagrams and the bottleneck distance.
To compute the persistent homology of a grayscale digital image one needs to build a simplicial or cubical complex from it. For cubical complexes, the two commonly used constructions (corresponding to direct and indirect digital adjacencies) can give different results for the same image. The two constructions are almost dual to each other, and we use this relationship to extend and modify the cubical complexes to become dual filtered cell complexes. We derive a general relationship between the persistent homology of two dual filtered cell complexes, and also establish how various modifications to a filtered complex change the persistence diagram. Applying these results to images, we derive a method to transform the persistence diagram computed using one type of cubical complex into a persistence diagram for the other construction. This means software for computing persistent homology from images can now be easily adapted to produce results for either of the two cubical complex constructions without additional low-level code implementation.
For a fixed $N$, we analyze the space of all sequences $z=(z_1,dots,z_N)$, approximating a continuous function on the circle, with a given persistence diagram $P$, and show that the typical components of this space are homotopy equivalent to $S^1$. We also consider the space of functions on $Y$-shaped (resp., star-shaped) trees with a 2-point persistence diagram, and show that this space is homotopy equivalent to $S^1$ (resp., to a bouquet of circles).
Persistent homology is a topological feature used in a variety of applications such as generating features for data analysis and penalizing optimization problems. We develop an approach to accelerate persistent homology computations performed on many similar filtered topological spaces which is based on updating associated matrix factorizations. Our approach improves the update scheme of Cohen-Steiner, Edelsbrunner, and Morozov for permutations by additionally handling addition and deletion of cells in a filtered topological space and by processing changes in a single batch. We show that the complexity of our scheme scales with the number of elementary changes to the filtration which as a result is often less expensive than the full persistent homology computation. Finally, we perform computational experiments demonstrating practical speedups in several situations including feature generation and optimization guided by persistent homology.
Multidimensional persistence studies topological features of shapes by analyzing the lower level sets of vector-valued functions. The rank invariant completely determines the multidimensional analogue of persistent homology groups. We prove that multidimensional rank invariants are stable with respect to function perturbations. More precisely, we construct a distance between rank invariants such that small changes of the function imply only small changes of the rank invariant. This result can be obtained by assuming the function to be just continuous. Multidimensional stability opens the way to a stable shape comparison methodology based on multidimensional persistence.