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Register a new userWatch Your Step: Learning Node Embeddings via Graph Attention
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Added by
Sami Abu-El-Haija
Publication date
2017
fields
Informatics Engineering
and research's language is
English
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Graph embedding methods represent nodes in a continuous vector space, preserving information from the graph (e.g. by sampling random walks). There are many hyper-parameters to these methods (such as random walk length) which have to be manually tuned for every graph. In this paper, we replace random walk hyper-parameters with trainable parameters that we automatically learn via backpropagation. In particular, we learn a novel attention model on the power series of the transition matrix, which guides the random walk to optimize an upstream objective. Unlike previous approaches to attention models, the method that we propose utilizes attention parameters exclusively on the data (e.g. on the random walk), and not used by the model for inference. We experiment on link prediction tasks, as we aim to produce embeddings that best-preserve the graph structure, generalizing to unseen information. We improve state-of-the-art on a comprehensive suite of real world datasets including social, collaboration, and biological networks. Adding attention to random walks can reduce the error by 20% to 45% on datasets we attempted. Further, our learned attention parameters are different for every graph, and our automatically-found values agree with the optimal choice of hyper-parameter if we manually tune existing methods.
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Are Graph Neural Networks (GNNs) fair? In many real world graphs, the formation of edges is related to certain node attributes (e.g. gender, community, reputation). In this case, standard GNNs using these edges will be biased by this information, as it is encoded in the structure of the adjacency matrix itself. In this paper, we show that when metadata is correlated with the formation of node neighborhoods, unsupervised node embedding dimensions learn this metadata. This bias implies an inability to control for important covariates in real-world applications, such as recommendation systems. To solve these issues, we introduce the Metadata-Orthogonal Node Embedding Training (MONET) unit, a general model for debiasing embeddings of nodes in a graph. MONET achieves this by ensuring that the node embeddings are trained on a hyperplane orthogonal to that of the node metadata. This effectively organizes unstructured embedding dimensions into an interpretable topology-only, metadata-only division with no linear interactions. We illustrate the effectiveness of MONET though our experiments on a variety of real world graphs, which shows that our method can learn and remove the effect of arbitrary covariates in tasks such as preventing the leakage of political party affiliation in a blog network, and thwarting the gaming of embedding-based recommendation systems.
Nodes residing in different parts of a graph can have similar structural roles within their local network topology. The identification of such roles provides key insight into the organization of networks and can be used for a variety of machine learning tasks. However, learning structural representations of nodes is a challenging problem, and it has typically involved manually specifying and tailoring topological features for each node. In this paper, we develop GraphWave, a method that represents each nodes network neighborhood via a low-dimensional embedding by leveraging heat wavelet diffusion patterns. Instead of training on hand-selected features, GraphWave learns these embeddings in an unsupervised way. We mathematically prove that nodes with similar network neighborhoods will have similar GraphWave embeddings even though these nodes may reside in very different parts of the network, and our method scales linearly with the number of edges. Experiments in a variety of different settings demonstrate GraphWaves real-world potential for capturing structural roles in networks, and our approach outperforms existing state-of-the-art baselines in every experiment, by as much as 137%.
The robustness of the much-used Graph Convolutional Networks (GCNs) to perturbations of their input is becoming a topic of increasing importance. In this paper, the random GCN is introduced for which a random matrix theory analysis is possible. This analysis suggests that if the graph is sufficiently perturbed, or in the extreme case random, then the GCN fails to benefit from the node features. It is furthermore observed that enhancing the message passing step in GCNs by adding the node feature kernel to the adjacency matrix of the graph structure solves this problem. An empirical study of a GCN utilised for node classification on six real datasets further confirms the theoretical findings and demonstrates that perturbations of the graph structure can result in GCNs performing significantly worse than Multi-Layer Perceptrons run on the node features alone. In practice, adding a node feature kernel to the message passing of perturbed graphs results in a significant improvement of the GCNs performance, thereby rendering it more robust to graph perturbations. Our code is publicly available at:https://github.com/ChangminWu/RobustGCN.
Graph embeddings are a ubiquitous tool for machine learning tasks, such as node classification and link prediction, on graph-structured data. However, computing the embeddings for large-scale graphs is prohibitively inefficient even if we are interested only in a small subset of relevant vertices. To address this, we present an efficient graph coarsening approach, based on Schur complements, for computing the embedding of the relevant vertices. We prove that these embeddings are preserved exactly by the Schur complement graph that is obtained via Gaussian elimination on the non-relevant vertices. As computing Schur complements is expensive, we give a nearly-linear time algorithm that generates a coarsened graph on the relevant vertices that provably matches the Schur complement in expectation in each iteration. Our experiments involving prediction tasks on graphs demonstrate that computing embeddings on the coarsened graph, rather than the entire graph, leads to significant time savings without sacrificing accuracy.
The potential for machine learning systems to amplify social inequities and unfairness is receiving increasing popular and academic attention. Much recent work has focused on developing algorithmic tools to assess and mitigate such unfairness. However, there is little work on enhancing fairness in graph algorithms. Here, we develop a simple, effective and general method, CrossWalk, that enhances fairness of various graph algorithms, including influence maximization, link prediction and node classification, applied to node embeddings. CrossWalk is applicable to any random walk based node representation learning algorithm, such as DeepWalk and Node2Vec. The key idea is to bias random walks to cross group boundaries, by upweighting edges which (1) are closer to the groups peripheries or (2) connect different groups in the network. CrossWalk pulls nodes that are near groups peripheries towards their neighbors from other groups in the embedding space, while preserving the necessary structural information from the graph. Extensive experiments show the effectiveness of our algorithm to enhance fairness in various graph algorithms, including influence maximization, link prediction and node classification in synthetic and real networks, with only a very small decrease in performance.
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