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Register a new userInformation Rates of ASK-Based Molecular Communication in Fluid Media
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Added by
Siavash Ghavami
Publication date
2015
fields
Informatics Engineering
and research's language is
English
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This paper studies the capacity of molecular communications in fluid media, where the information is encoded in the number of transmitted molecules in a time-slot (amplitude shift keying). The propagation of molecules is governed by random Brownian motion and the communication is in general subject to inter-symbol interference (ISI). We first consider the case where ISI is negligible and analyze the capacity and the capacity per unit cost of the resulting discrete memoryless molecular channel and the effect of possible practical constraints, such as limitations on peak and/or average number of transmitted molecules per transmission. In the case with a constrained peak molecular emission, we show that as the time-slot duration increases, the input distribution achieving the capacity per channel use transitions from binary inputs to a discrete uniform distribution. In this paper, we also analyze the impact of ISI. Crucially, we account for the correlation that ISI induces between channel output symbols. We derive an upper bound and two lower bounds on the capacity in this setting. Using the input distribution obtained by an extended Blahut-Arimoto algorithm, we maximize the lower bounds. Our results show that, over a wide range of parameter values, the bounds are close.
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A diffusion-based molecular communication system has two major components: the diffusion in the medium, and the ligand-reception. Information bits, encoded in the time variations of the concentration of molecules, are conveyed to the receiver front through the molecular diffusion in the medium. The receiver, in turn, measures the concentration of the molecules in its vicinity in order to retrieve the information. This is done via ligand-reception process. In this paper, we develop models to study the constraints imposed by the concentration sensing at the receiver side and derive the maximum rate by which a ligand-receiver can receive information. Therefore, the overall capacity of the diffusion channel with the ligand receptors can be obtained by combining the results presented in this paper with our previous work on the achievable information rate of molecular communication over the diffusion channel.
There are now several works on the use of the additive inverse Gaussian noise (AIGN) model for the random transit time in molecular communication~(MC) channels. The randomness invariably causes inter-symbol interference (ISI) in MC, an issue largely ignored or simplified. In this paper we derive an upper bound and two lower bounds for MC based on amplitude shift keying (ASK) in presence of ISI. The Blahut-Arimoto algorithm~(BAA) is modified to find the input distribution of transmitted symbols to maximize the lower bounds. Our results show that over wide parameter values the bounds are close.
We consider an echo-assisted communication model wherein block-coded messages, when transmitted across several frames, reach the destination as multiple noisy copies. We address adversarial attacks on such models wherein a subset of the noisy copies are vulnerable to manipulation by an adversary. Particularly, we study a non-persistent attack model with the adversary attacking 50% of the frames on the vulnerable copies in an i.i.d. fashion. We show that this adversarial model drives the destination to detect the attack locally within every frame, thereby resulting in degraded performance due to false-positives and miss-detection. Our main objective is to characterize the mutual information of this adversarial echo-assisted channel by incorporating the performance of attack-detection strategies. With the use of an imperfect detector, we show that the compound channel comprising the adversarial echo-assisted channel and the attack detector exhibits memory-property, and as a result, obtaining closed-form expressions on mutual information is intractable. To circumvent this problem, we present a new framework to approximate the mutual information by deriving sufficient conditions on the channel parameters and also the performance of the attack detectors. Finally, we propose two attack-detectors, which are inspired by traditional as well as neural-network ideas, and show that the mutual information offered by these detectors is close to that of the Genie detector for short frame-lengths.
Molecular communication (MC) allows nanomachines to communicate and cooperate with each other in a fluid environment. The diffusion-based MC is popular but is easily constrained by the transmit distance due to the severe attenuation of molecule concentrations. In this letter, we present a decode-and-forward (DF) relay strategy for the reversible binding receptor in the diffusion-based MC system. The time-varying spatial distribution of the information molecules based on the reversible association and dissociation between ligand and receptor at the surface of receiver is characterized. An analytical expression for the evaluation of expected error probability is derived, and the key factors impacting on the performance are exploited. Results show that with a constant molecular budget, the proposal can improve the performance significantly, and the performance gain can be enhanced by optimizing the position of the relay node and the number of molecules assigned to the source node.
Molecular communication is an expanding body of research. Recent advances in biology have encouraged using genetically engineered bacteria as the main component in the molecular communication. This has stimulated a new line of research that attempts to study molecular communication among bacteria from an information-theoretic point of view. Due to high randomness in the individual behavior of the bacterium, reliable communication between two bacteria is almost impossible. Therefore, we recently proposed that a population of bacteria in a cluster is considered as a node capable of molecular transmission and reception. This proposition enables us to form a reliable node out of many unreliable bacteria. The bacteria inside a node sense the environment and respond accordingly. In this paper, we study the communication between two nodes, one acting as the transmitter and the other as the receiver. We consider the case in which the information is encoded in the concentration of molecules by the transmitter. The molecules produced by the bacteria in the transmitter node propagate in the environment via the diffusion process. Then, their concentration sensed by the bacteria in the receiver node would decode the information. The randomness in the communication is caused by both the error in the molecular production at the transmitter and the reception of molecules at the receiver. We study the theoretical limits of the information transfer rate in such a setup versus the number of bacteria per node. Finally, we consider M-ary modulation schemes and study the achievable rates and their error probabilities.
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