The isothermal compressibility of a general crystal is analyzed within classical density functional theory. Our approach can be used for homogeneous and unstrained crystals containing an arbitrarily high density of local defects. We start by coarse-graining the microscopic particle density and then obtain the long wavelength limits of the correlation functions of elasticity theory and the thermodynamic derivatives. We explicitly show that the long wavelength limit of the microscopic density correlation function differs from the isothermal compressibility. It also cannot be obtained from the static structure factor measured in a scattering experiment. We apply our theory to crystals consisting of soft particles which can multiply occupy lattice sites (cluster crystals). The multiple occupancy results in a strong local disorder over an extended range of temperatures. We determine the cluster crystals isothermal compressibility, the fluctuations of the lattice occupation numbers and their correlation functions, and the dispersion relations. We also discuss their low-temperature phase diagram.
Recent experiments have found that applied electric fields can induce motion of skyrmions in chiral nematic liquid crystals. To understand the magnitude and direction of the induced motion, we develop a coarse-grained approach to describe dynamics of skyrmions, similar to our groups previous work on the dynamics of disclinations. In this approach, we represent a localized excitation in terms of a few macroscopic degrees of freedom, including the position of the excitation and the orientation of the background director. We then derive the Rayleigh dissipation function, and hence the equations of motion, in terms of these macroscopic variables. We demonstrate this theoretical approach for 1D motion of a sine-Gordon soliton, and then extend it to 2D motion of a skyrmion. Our results show that skyrmions move in a direction perpendicular to the induced tilt of the background director. When the applied field is removed, skyrmions move in the opposite direction but not with equal magnitude, and hence the overall motion may be rectified.
When a colloid is mixed with a depletant such as a non-adsorbing polymer, one observes attractive effective interactions between the colloidal particles. If these particles are anisotropic, analysis of these effective interactions is challenging in general. We present a method for inference of approximate (coarse-grained) effective interaction potentials between such anisotropic particles. Using the example of indented (lock-and-key) colloids, we show how numerical solutions can be used to integrate out the (hard sphere) depletant, leading to a depletion potential that accurately characterises the effective interactions. The accuracy of the method is based on matching of contributions to the second virial coefficient of the colloids. The simplest version of our method yields a piecewise-constant effective potential; we also show how this scheme can be generalised to other functional forms, where appropriate.
Using concepts from integral geometry, we propose a definition for a local coarse-grained curvature tensor that is well-defined on polygonal surfaces. This coarse-grained curvature tensor shows fast convergence to the curvature tensor of smooth surfaces, capturing with accuracy not only the principal curvatures but also the principal directions of curvature. Thanks to the additivity of the integrated curvature tensor, coarse-graining procedures can be implemented to compute it over arbitrary patches of polygons. When computed for a closed surface, the integrated curvature tensor is identical to a rank-2 Minkowski tensor. We also provide an algorithm to extend an existing C++ package, that can be used to compute efficiently local curvature tensors on triangulated surfaces.
A first-principle multiscale modeling approach is presented, which is derived from the solution of the Ornstein-Zernike equation for the coarse-grained representation of polymer liquids. The approach is analytical, and for this reason is transferable. It is here applied to determine the structure of several polymeric systems, which have different parameter values, such as molecular length, monomeric structure, local flexibility, and thermodynamic conditions. When the pair distribution function obtained from this procedure is compared with the results from a full atomistic simulation, it shows quantitative agreement. Moreover, the multiscale procedure accurately captures both large and local scale properties while remaining computationally advantageous.
Integral equation theory is applied to a coarse-grained model of water to study potential of mean force between hydrophobic solutes. Theory is shown to be in good agreement with the available simulation data for methane-methane and fullerene-fullerene potential of mean force in water; the potential of mean force is also decomposed into its entropic and enthalpic contributions. Mode coupling theory is employed to compute self-diffusion coefficient of water, as well as diffusion coefficient of a dilute hydrophobic solute; good agreement with molecular dynamics simulation results is found.
Johannes Haring
,Christof Walz
,Grzegorz Szamel
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(2015)
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"On the coarse-grained density and compressibility of non-ideal crystals: general theory and an application to cluster crystals"
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Matthias Fuchs
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